Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
HACD3Q9P035 AC096582.2-201ENST00000510860 516 ntBASIC17.7■□□□□ 0.42
HACD3Q9P035 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.7■□□□□ 0.42
HACD3Q9P035 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.7■□□□□ 0.42
HACD3Q9P035 AC114341.1-201ENST00000618070 349 ntBASIC17.7■□□□□ 0.42
HACD3Q9P035 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.7■□□□□ 0.42
HACD3Q9P035 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HACD3Q9P035 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
HACD3Q9P035 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HACD3Q9P035 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HACD3Q9P035 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HACD3Q9P035 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HACD3Q9P035 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HACD3Q9P035 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
HACD3Q9P035 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HACD3Q9P035 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HACD3Q9P035 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HACD3Q9P035 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HACD3Q9P035 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HACD3Q9P035 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.69■□□□□ 0.42
HACD3Q9P035 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
HACD3Q9P035 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.69■□□□□ 0.42
HACD3Q9P035 IGHV3-52-201ENST00000519770 353 ntBASIC17.69■□□□□ 0.42
HACD3Q9P035 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.69■□□□□ 0.42
HACD3Q9P035 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.69■□□□□ 0.42
HACD3Q9P035 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.69■□□□□ 0.42
HACD3Q9P035 AC099336.1-202ENST00000602961 463 ntBASIC17.69■□□□□ 0.42
HACD3Q9P035 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.69■□□□□ 0.42
HACD3Q9P035 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.69■□□□□ 0.42
HACD3Q9P035 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HACD3Q9P035 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.69■□□□□ 0.42
HACD3Q9P035 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HACD3Q9P035 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.69■□□□□ 0.42
HACD3Q9P035 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HACD3Q9P035 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HACD3Q9P035 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HACD3Q9P035 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
HACD3Q9P035 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HACD3Q9P035 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HACD3Q9P035 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HACD3Q9P035 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HACD3Q9P035 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HACD3Q9P035 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HACD3Q9P035 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HACD3Q9P035 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HACD3Q9P035 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HACD3Q9P035 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.68■□□□□ 0.42
HACD3Q9P035 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.68■□□□□ 0.42
HACD3Q9P035 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.68■□□□□ 0.42
HACD3Q9P035 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HACD3Q9P035 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.68■□□□□ 0.42
HACD3Q9P035 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.68■□□□□ 0.42
HACD3Q9P035 AC111152.3-201ENST00000569699 673 ntBASIC17.68■□□□□ 0.42
HACD3Q9P035 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.68■□□□□ 0.42
HACD3Q9P035 MIR3652-201ENST00000579335 131 ntBASIC17.68■□□□□ 0.42
HACD3Q9P035 AL138688.1-201ENST00000624851 1594 ntBASIC17.68■□□□□ 0.42
HACD3Q9P035 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.68■□□□□ 0.42
HACD3Q9P035 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HACD3Q9P035 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HACD3Q9P035 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.68■□□□□ 0.42
HACD3Q9P035 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
HACD3Q9P035 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HACD3Q9P035 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HACD3Q9P035 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HACD3Q9P035 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HACD3Q9P035 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.68■□□□□ 0.42
HACD3Q9P035 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
HACD3Q9P035 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HACD3Q9P035 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HACD3Q9P035 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.67■□□□□ 0.42
HACD3Q9P035 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HACD3Q9P035 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HACD3Q9P035 INTS4P1-201ENST00000438455 1935 ntBASIC17.67■□□□□ 0.42
HACD3Q9P035 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HACD3Q9P035 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HACD3Q9P035 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.67■□□□□ 0.42
HACD3Q9P035 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HACD3Q9P035 NFIC-211ENST00000641145 8399 ntBASIC17.67■□□□□ 0.42
HACD3Q9P035 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HACD3Q9P035 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HACD3Q9P035 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HACD3Q9P035 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.67■□□□□ 0.42
HACD3Q9P035 NUS1P1-201ENST00000446295 882 ntBASIC17.67■□□□□ 0.42
HACD3Q9P035 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.67■□□□□ 0.42
HACD3Q9P035 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.67■□□□□ 0.42
HACD3Q9P035 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.67■□□□□ 0.42
HACD3Q9P035 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.67■□□□□ 0.42
HACD3Q9P035 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.67■□□□□ 0.42
HACD3Q9P035 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HACD3Q9P035 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HACD3Q9P035 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HACD3Q9P035 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HACD3Q9P035 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HACD3Q9P035 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.67■□□□□ 0.42
HACD3Q9P035 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HACD3Q9P035 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HACD3Q9P035 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HACD3Q9P035 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.67■□□□□ 0.42
HACD3Q9P035 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HACD3Q9P035 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms