Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.67■□□□□ 0.1
PARPBPQ9NWS1 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.67■□□□□ 0.1
PARPBPQ9NWS1 IGHV3-52-201ENST00000519770 353 ntBASIC15.67■□□□□ 0.1
PARPBPQ9NWS1 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.67■□□□□ 0.1
PARPBPQ9NWS1 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PARPBPQ9NWS1 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.67■□□□□ 0.1
PARPBPQ9NWS1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.67■□□□□ 0.1
PARPBPQ9NWS1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.67■□□□□ 0.1
PARPBPQ9NWS1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PARPBPQ9NWS1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.67■□□□□ 0.1
PARPBPQ9NWS1 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PARPBPQ9NWS1 AC068880.1-201ENST00000507289 2297 ntBASIC15.67■□□□□ 0.1
PARPBPQ9NWS1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PARPBPQ9NWS1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PARPBPQ9NWS1 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PARPBPQ9NWS1 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.67■□□□□ 0.1
PARPBPQ9NWS1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PARPBPQ9NWS1 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.67■□□□□ 0.1
PARPBPQ9NWS1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.67■□□□□ 0.1
PARPBPQ9NWS1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.67■□□□□ 0.1
PARPBPQ9NWS1 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PARPBPQ9NWS1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PARPBPQ9NWS1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.67■□□□□ 0.1
PARPBPQ9NWS1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PARPBPQ9NWS1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 MYCLP1-201ENST00000372451 1075 ntBASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 AC006116.8-202ENST00000587620 1550 ntBASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.66■□□□□ 0.1
PARPBPQ9NWS1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 AC002558.1-201ENST00000488906 803 ntBASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PARPBPQ9NWS1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
PARPBPQ9NWS1 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms