Protein–RNA interactions for Protein: Q9BYD9

ACTRT3, Actin-related protein T3, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTRT3Q9BYD9 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ACTRT3Q9BYD9 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ACTRT3Q9BYD9 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ACTRT3Q9BYD9 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ACTRT3Q9BYD9 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.29■□□□□ 0.2
ACTRT3Q9BYD9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
ACTRT3Q9BYD9 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ACTRT3Q9BYD9 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ACTRT3Q9BYD9 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ACTRT3Q9BYD9 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.29■□□□□ 0.2
ACTRT3Q9BYD9 TP73-AS1-210ENST00000637775 1455 ntBASIC16.29■□□□□ 0.2
ACTRT3Q9BYD9 AC046185.3-201ENST00000623228 1824 ntBASIC16.29■□□□□ 0.2
ACTRT3Q9BYD9 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 LINC00265-3P-201ENST00000447588 903 ntBASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 STK25P1-201ENST00000585406 838 ntBASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 AC069148.1-201ENST00000608741 768 ntBASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 AC091076.1-201ENST00000610741 619 ntBASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 AC080080.1-201ENST00000625121 2420 ntBASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 AL353593.2-201ENST00000602529 1483 ntBASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
ACTRT3Q9BYD9 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 NSUN5P1-202ENST00000421140 1535 ntBASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 NSUN5P2-203ENST00000457352 1529 ntBASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ACTRT3Q9BYD9 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ACTRT3Q9BYD9 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.27■□□□□ 0.19
ACTRT3Q9BYD9 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
ACTRT3Q9BYD9 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms