Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM62Q9BVG3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM62Q9BVG3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
TRIM62Q9BVG3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM62Q9BVG3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM62Q9BVG3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM62Q9BVG3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TRIM62Q9BVG3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TRIM62Q9BVG3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM62Q9BVG3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM62Q9BVG3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM62Q9BVG3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM62Q9BVG3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM62Q9BVG3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
TRIM62Q9BVG3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM62Q9BVG3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM62Q9BVG3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM62Q9BVG3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM62Q9BVG3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM62Q9BVG3 FAM197Y8-203ENST00000450145 560 ntBASIC18.19■□□□□ 0.5
TRIM62Q9BVG3 BX005266.1-201ENST00000473402 457 ntBASIC18.19■□□□□ 0.5
TRIM62Q9BVG3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.19■□□□□ 0.5
TRIM62Q9BVG3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.19■□□□□ 0.5
TRIM62Q9BVG3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM62Q9BVG3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM62Q9BVG3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIM62Q9BVG3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM62Q9BVG3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM62Q9BVG3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM62Q9BVG3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM62Q9BVG3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM62Q9BVG3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM62Q9BVG3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 LAGE3P1-201ENST00000425356 484 ntBASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 AC079781.3-201ENST00000449110 356 ntBASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 AP002469.2-201ENST00000531724 424 ntBASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 AC139887.3-201ENST00000568585 713 ntBASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 AC148477.5-201ENST00000625164 1645 ntBASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM62Q9BVG3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TRIM62Q9BVG3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TRIM62Q9BVG3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM62Q9BVG3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM62Q9BVG3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM62Q9BVG3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM62Q9BVG3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
TRIM62Q9BVG3 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.17■□□□□ 0.5
TRIM62Q9BVG3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM62Q9BVG3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.17■□□□□ 0.5
TRIM62Q9BVG3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM62Q9BVG3 RNPS1P1-201ENST00000507437 918 ntBASIC18.17■□□□□ 0.5
TRIM62Q9BVG3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM62Q9BVG3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.17■□□□□ 0.5
TRIM62Q9BVG3 AC021087.4-201ENST00000563761 564 ntBASIC18.17■□□□□ 0.5
TRIM62Q9BVG3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM62Q9BVG3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.17■□□□□ 0.5
TRIM62Q9BVG3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM62Q9BVG3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM62Q9BVG3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRIM62Q9BVG3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM62Q9BVG3 AC104692.2-201ENST00000603054 253 ntBASIC18.17■□□□□ 0.5
TRIM62Q9BVG3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM62Q9BVG3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms