Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF4Q9BUZ4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAF4Q9BUZ4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF4Q9BUZ4 AP000593.1-201ENST00000393668 712 ntBASIC15.67■□□□□ 0.1
TRAF4Q9BUZ4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TRAF4Q9BUZ4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAF4Q9BUZ4 KRT17P6-201ENST00000453795 1220 ntBASIC15.67■□□□□ 0.1
TRAF4Q9BUZ4 FOSL1P1-201ENST00000511041 816 ntBASIC15.67■□□□□ 0.1
TRAF4Q9BUZ4 GUSBP12-201ENST00000513727 720 ntBASIC15.67■□□□□ 0.1
TRAF4Q9BUZ4 KRT18P41-201ENST00000518924 1277 ntBASIC15.67■□□□□ 0.1
TRAF4Q9BUZ4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.67■□□□□ 0.1
TRAF4Q9BUZ4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAF4Q9BUZ4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TRAF4Q9BUZ4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAF4Q9BUZ4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF4Q9BUZ4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.67■□□□□ 0.1
TRAF4Q9BUZ4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF4Q9BUZ4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF4Q9BUZ4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAF4Q9BUZ4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRAF4Q9BUZ4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF4Q9BUZ4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF4Q9BUZ4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TRAF4Q9BUZ4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF4Q9BUZ4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF4Q9BUZ4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAF4Q9BUZ4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF4Q9BUZ4 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.67■□□□□ 0.1
TRAF4Q9BUZ4 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 AC233702.3-201ENST00000578656 1387 ntBASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 AC074051.2-201ENST00000565115 352 ntBASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 LINC01711-201ENST00000598340 967 ntBASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 Z69720.1-201ENST00000601483 472 ntBASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 AL592071.1-201ENST00000611956 408 ntBASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 MTMR9LP-203ENST00000426597 1545 ntBASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAF4Q9BUZ4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF4Q9BUZ4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRAF4Q9BUZ4 UBALD1-205ENST00000590891 2641 ntBASIC15.65■□□□□ 0.1
TRAF4Q9BUZ4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.65■□□□□ 0.1
TRAF4Q9BUZ4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRAF4Q9BUZ4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF4Q9BUZ4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF4Q9BUZ4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.65■□□□□ 0.1
TRAF4Q9BUZ4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF4Q9BUZ4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF4Q9BUZ4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF4Q9BUZ4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF4Q9BUZ4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF4Q9BUZ4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF4Q9BUZ4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF4Q9BUZ4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF4Q9BUZ4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
TRAF4Q9BUZ4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAF4Q9BUZ4 FDX1P1-201ENST00000449115 551 ntBASIC15.65■□□□□ 0.1
TRAF4Q9BUZ4 KRT18P31-201ENST00000506277 1292 ntBASIC15.65■□□□□ 0.1
TRAF4Q9BUZ4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAF4Q9BUZ4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.65■□□□□ 0.1
TRAF4Q9BUZ4 AC124864.1-201ENST00000623408 392 ntBASIC15.65■□□□□ 0.1
TRAF4Q9BUZ4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAF4Q9BUZ4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF4Q9BUZ4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF4Q9BUZ4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF4Q9BUZ4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TRAF4Q9BUZ4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAF4Q9BUZ4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms