Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV9Q99603 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TRGV9Q99603 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV9Q99603 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TRGV9Q99603 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV9Q99603 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV9Q99603 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV9Q99603 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV9Q99603 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.63□□□□□ -0.23
TRGV9Q99603 AGGF1P2-201ENST00000426656 2106 ntBASIC13.63□□□□□ -0.23
TRGV9Q99603 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV9Q99603 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
TRGV9Q99603 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC13.63□□□□□ -0.23
TRGV9Q99603 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV9Q99603 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC13.63□□□□□ -0.23
TRGV9Q99603 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.63□□□□□ -0.23
TRGV9Q99603 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC13.63□□□□□ -0.23
TRGV9Q99603 PON3-205ENST00000451904 1053 ntTSL 3 BASIC13.63□□□□□ -0.23
TRGV9Q99603 AL359075.1-203ENST00000462729 1002 ntBASIC13.63□□□□□ -0.23
TRGV9Q99603 SNX5-210ENST00000481323 562 ntTSL 3 BASIC13.63□□□□□ -0.23
TRGV9Q99603 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.63□□□□□ -0.23
TRGV9Q99603 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC13.63□□□□□ -0.23
TRGV9Q99603 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.63□□□□□ -0.23
TRGV9Q99603 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV9Q99603 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV9Q99603 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV9Q99603 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.63□□□□□ -0.23
TRGV9Q99603 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.63□□□□□ -0.23
TRGV9Q99603 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.63□□□□□ -0.23
TRGV9Q99603 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TRGV9Q99603 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV9Q99603 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV9Q99603 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.63□□□□□ -0.23
TRGV9Q99603 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV9Q99603 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV9Q99603 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC13.63□□□□□ -0.23
TRGV9Q99603 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV9Q99603 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV9Q99603 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.62□□□□□ -0.23
TRGV9Q99603 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
TRGV9Q99603 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV9Q99603 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV9Q99603 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV9Q99603 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV9Q99603 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV9Q99603 AC046185.3-201ENST00000623228 1824 ntBASIC13.62□□□□□ -0.23
TRGV9Q99603 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV9Q99603 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV9Q99603 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TRGV9Q99603 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV9Q99603 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV9Q99603 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV9Q99603 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.62□□□□□ -0.23
TRGV9Q99603 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TRGV9Q99603 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV9Q99603 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV9Q99603 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV9Q99603 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV9Q99603 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV9Q99603 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.62□□□□□ -0.23
TRGV9Q99603 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV9Q99603 SLC25A1P3-201ENST00000395415 828 ntBASIC13.62□□□□□ -0.23
TRGV9Q99603 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV9Q99603 GXYLT1P3-201ENST00000453058 1193 ntBASIC13.62□□□□□ -0.23
TRGV9Q99603 YBX1P2-201ENST00000489612 999 ntBASIC13.62□□□□□ -0.23
TRGV9Q99603 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
TRGV9Q99603 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
TRGV9Q99603 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC13.62□□□□□ -0.23
TRGV9Q99603 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC13.62□□□□□ -0.23
TRGV9Q99603 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV9Q99603 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC13.62□□□□□ -0.23
TRGV9Q99603 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC13.62□□□□□ -0.23
TRGV9Q99603 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV9Q99603 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV9Q99603 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.62□□□□□ -0.23
TRGV9Q99603 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC13.62□□□□□ -0.23
TRGV9Q99603 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV9Q99603 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.62□□□□□ -0.23
TRGV9Q99603 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV9Q99603 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV9Q99603 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV9Q99603 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV9Q99603 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
TRGV9Q99603 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.62□□□□□ -0.23
TRGV9Q99603 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV9Q99603 AC010460.3-201ENST00000511359 1579 ntBASIC13.62□□□□□ -0.23
TRGV9Q99603 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC13.62□□□□□ -0.23
TRGV9Q99603 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.62□□□□□ -0.23
TRGV9Q99603 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC13.62□□□□□ -0.23
TRGV9Q99603 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV9Q99603 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV9Q99603 AC105020.1-201ENST00000435356 2205 ntBASIC13.62□□□□□ -0.23
TRGV9Q99603 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV9Q99603 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.62□□□□□ -0.23
TRGV9Q99603 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRGV9Q99603 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRGV9Q99603 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRGV9Q99603 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRGV9Q99603 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRGV9Q99603 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms