Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RPRD1AQ96P16 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPRD1AQ96P16 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPRD1AQ96P16 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RPRD1AQ96P16 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPRD1AQ96P16 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPRD1AQ96P16 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPRD1AQ96P16 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.01■□□□□ 0.47
RPRD1AQ96P16 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RPRD1AQ96P16 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
RPRD1AQ96P16 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RPRD1AQ96P16 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
RPRD1AQ96P16 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
RPRD1AQ96P16 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RPRD1AQ96P16 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RPRD1AQ96P16 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18■□□□□ 0.47
RPRD1AQ96P16 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
RPRD1AQ96P16 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
RPRD1AQ96P16 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RPRD1AQ96P16 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18■□□□□ 0.47
RPRD1AQ96P16 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18■□□□□ 0.47
RPRD1AQ96P16 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RPRD1AQ96P16 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18■□□□□ 0.47
RPRD1AQ96P16 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18■□□□□ 0.47
RPRD1AQ96P16 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18■□□□□ 0.47
RPRD1AQ96P16 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RPRD1AQ96P16 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18■□□□□ 0.47
RPRD1AQ96P16 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RPRD1AQ96P16 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18■□□□□ 0.47
RPRD1AQ96P16 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
RPRD1AQ96P16 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RPRD1AQ96P16 FDX1P1-201ENST00000449115 551 ntBASIC18■□□□□ 0.47
RPRD1AQ96P16 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RPRD1AQ96P16 AC025062.2-201ENST00000605477 670 ntBASIC18■□□□□ 0.47
RPRD1AQ96P16 AL773604.1-201ENST00000617417 272 ntBASIC18■□□□□ 0.47
RPRD1AQ96P16 AC148477.8-201ENST00000624298 468 ntBASIC18■□□□□ 0.47
RPRD1AQ96P16 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RPRD1AQ96P16 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
RPRD1AQ96P16 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18■□□□□ 0.47
RPRD1AQ96P16 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18■□□□□ 0.47
RPRD1AQ96P16 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
RPRD1AQ96P16 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
RPRD1AQ96P16 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RPRD1AQ96P16 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 AC018712.1-201ENST00000455767 687 ntBASIC17.99■□□□□ 0.47
RPRD1AQ96P16 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
RPRD1AQ96P16 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RPRD1AQ96P16 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
RPRD1AQ96P16 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RPRD1AQ96P16 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.98■□□□□ 0.47
RPRD1AQ96P16 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RPRD1AQ96P16 AC046185.3-201ENST00000623228 1824 ntBASIC17.98■□□□□ 0.47
RPRD1AQ96P16 LYSMD4-203ENST00000378904 2122 ntBASIC17.98■□□□□ 0.47
RPRD1AQ96P16 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPRD1AQ96P16 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RPRD1AQ96P16 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RPRD1AQ96P16 RPS2P1-201ENST00000434010 821 ntBASIC17.98■□□□□ 0.47
RPRD1AQ96P16 PRYP5-201ENST00000451909 266 ntBASIC17.98■□□□□ 0.47
RPRD1AQ96P16 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.98■□□□□ 0.47
RPRD1AQ96P16 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RPRD1AQ96P16 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.98■□□□□ 0.47
RPRD1AQ96P16 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.98■□□□□ 0.47
RPRD1AQ96P16 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.98■□□□□ 0.47
RPRD1AQ96P16 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.98■□□□□ 0.47
RPRD1AQ96P16 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.98■□□□□ 0.47
RPRD1AQ96P16 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RPRD1AQ96P16 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.98■□□□□ 0.47
RPRD1AQ96P16 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.98■□□□□ 0.47
RPRD1AQ96P16 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms