Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AL078644.1-201ENST00000609881 752 ntBASIC20.41■□□□□ 0.86
TRIM47Q96LD4 AL513190.1-201ENST00000621254 727 ntBASIC20.41■□□□□ 0.86
TRIM47Q96LD4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.41■□□□□ 0.86
TRIM47Q96LD4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM47Q96LD4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM47Q96LD4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TRIM47Q96LD4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM47Q96LD4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM47Q96LD4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM47Q96LD4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
TRIM47Q96LD4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM47Q96LD4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TRIM47Q96LD4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM47Q96LD4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM47Q96LD4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM47Q96LD4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM47Q96LD4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM47Q96LD4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM47Q96LD4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM47Q96LD4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
TRIM47Q96LD4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM47Q96LD4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM47Q96LD4 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.4■□□□□ 0.86
TRIM47Q96LD4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM47Q96LD4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM47Q96LD4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM47Q96LD4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
TRIM47Q96LD4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM47Q96LD4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.4■□□□□ 0.86
TRIM47Q96LD4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM47Q96LD4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM47Q96LD4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM47Q96LD4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.4■□□□□ 0.86
TRIM47Q96LD4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TRIM47Q96LD4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.4■□□□□ 0.86
TRIM47Q96LD4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM47Q96LD4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.4■□□□□ 0.86
TRIM47Q96LD4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.4■□□□□ 0.86
TRIM47Q96LD4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.4■□□□□ 0.86
TRIM47Q96LD4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM47Q96LD4 LETM1P2-201ENST00000597330 2178 ntBASIC20.4■□□□□ 0.86
TRIM47Q96LD4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
TRIM47Q96LD4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TRIM47Q96LD4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM47Q96LD4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM47Q96LD4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM47Q96LD4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM47Q96LD4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
TRIM47Q96LD4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM47Q96LD4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM47Q96LD4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
TRIM47Q96LD4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM47Q96LD4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM47Q96LD4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.39■□□□□ 0.85
TRIM47Q96LD4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM47Q96LD4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.39■□□□□ 0.85
TRIM47Q96LD4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
TRIM47Q96LD4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.39■□□□□ 0.85
TRIM47Q96LD4 CRYGEP-201ENST00000412192 528 ntBASIC20.39■□□□□ 0.85
TRIM47Q96LD4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.39■□□□□ 0.85
TRIM47Q96LD4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.39■□□□□ 0.85
TRIM47Q96LD4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM47Q96LD4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.39■□□□□ 0.85
TRIM47Q96LD4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM47Q96LD4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
TRIM47Q96LD4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM47Q96LD4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM47Q96LD4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM47Q96LD4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM47Q96LD4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM47Q96LD4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM47Q96LD4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
TRIM47Q96LD4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM47Q96LD4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM47Q96LD4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM47Q96LD4 ELL2P1-201ENST00000413990 1906 ntBASIC20.38■□□□□ 0.85
TRIM47Q96LD4 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM47Q96LD4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.38■□□□□ 0.85
TRIM47Q96LD4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.38■□□□□ 0.85
TRIM47Q96LD4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.38■□□□□ 0.85
TRIM47Q96LD4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
TRIM47Q96LD4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC20.38■□□□□ 0.85
TRIM47Q96LD4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TRIM47Q96LD4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TRIM47Q96LD4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.38■□□□□ 0.85
TRIM47Q96LD4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
TRIM47Q96LD4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.38■□□□□ 0.85
TRIM47Q96LD4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
TRIM47Q96LD4 AC239800.4-201ENST00000603712 296 ntBASIC20.38■□□□□ 0.85
TRIM47Q96LD4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM47Q96LD4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM47Q96LD4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM47Q96LD4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM47Q96LD4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.38■□□□□ 0.85
TRIM47Q96LD4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.38■□□□□ 0.85
TRIM47Q96LD4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.38■□□□□ 0.85
TRIM47Q96LD4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM47Q96LD4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM47Q96LD4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM47Q96LD4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms