Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMARCD1Q96GM5 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMARCD1Q96GM5 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SMARCD1Q96GM5 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMARCD1Q96GM5 LINC00982-205ENST00000420957 435 ntBASIC18.35■□□□□ 0.53
SMARCD1Q96GM5 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.35■□□□□ 0.53
SMARCD1Q96GM5 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SMARCD1Q96GM5 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.35■□□□□ 0.53
SMARCD1Q96GM5 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.35■□□□□ 0.53
SMARCD1Q96GM5 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.35■□□□□ 0.53
SMARCD1Q96GM5 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SMARCD1Q96GM5 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.35■□□□□ 0.53
SMARCD1Q96GM5 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.35■□□□□ 0.53
SMARCD1Q96GM5 MIR1199-201ENST00000621445 119 ntBASIC18.35■□□□□ 0.53
SMARCD1Q96GM5 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMARCD1Q96GM5 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
SMARCD1Q96GM5 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMARCD1Q96GM5 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMARCD1Q96GM5 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMARCD1Q96GM5 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 AP002414.3-201ENST00000589352 1468 ntBASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 AL022342.1-201ENST00000400363 863 ntBASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 AL356488.2-201ENST00000602755 427 ntBASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCD1Q96GM5 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.33■□□□□ 0.53
SMARCD1Q96GM5 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SMARCD1Q96GM5 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SMARCD1Q96GM5 AL133373.2-201ENST00000623187 2828 ntBASIC18.33■□□□□ 0.53
SMARCD1Q96GM5 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SMARCD1Q96GM5 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SMARCD1Q96GM5 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SMARCD1Q96GM5 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.33■□□□□ 0.53
SMARCD1Q96GM5 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SMARCD1Q96GM5 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMARCD1Q96GM5 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SMARCD1Q96GM5 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMARCD1Q96GM5 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMARCD1Q96GM5 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMARCD1Q96GM5 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SMARCD1Q96GM5 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.33■□□□□ 0.52
SMARCD1Q96GM5 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.33■□□□□ 0.52
SMARCD1Q96GM5 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.33■□□□□ 0.52
SMARCD1Q96GM5 AC073621.1-201ENST00000392730 636 ntBASIC18.33■□□□□ 0.52
SMARCD1Q96GM5 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.33■□□□□ 0.52
SMARCD1Q96GM5 ELK2BP-201ENST00000415014 1224 ntBASIC18.33■□□□□ 0.52
SMARCD1Q96GM5 AC098831.1-202ENST00000438821 336 ntBASIC18.33■□□□□ 0.52
SMARCD1Q96GM5 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.33■□□□□ 0.52
SMARCD1Q96GM5 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMARCD1Q96GM5 AC136632.2-201ENST00000512891 861 ntBASIC18.33■□□□□ 0.52
SMARCD1Q96GM5 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMARCD1Q96GM5 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.33■□□□□ 0.52
SMARCD1Q96GM5 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.33■□□□□ 0.52
SMARCD1Q96GM5 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.33■□□□□ 0.52
SMARCD1Q96GM5 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
SMARCD1Q96GM5 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
SMARCD1Q96GM5 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SMARCD1Q96GM5 PGM5P2-202ENST00000637225 1043 ntBASIC18.33■□□□□ 0.52
SMARCD1Q96GM5 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMARCD1Q96GM5 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.33■□□□□ 0.52
SMARCD1Q96GM5 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.33■□□□□ 0.52
SMARCD1Q96GM5 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMARCD1Q96GM5 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms