Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.29■□□□□ 0.52
RNF34Q969K3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.29■□□□□ 0.52
RNF34Q969K3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF34Q969K3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.29■□□□□ 0.52
RNF34Q969K3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
RNF34Q969K3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.29■□□□□ 0.52
RNF34Q969K3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RNF34Q969K3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF34Q969K3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF34Q969K3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.29■□□□□ 0.52
RNF34Q969K3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF34Q969K3 KRT8P10-201ENST00000450021 1447 ntBASIC18.29■□□□□ 0.52
RNF34Q969K3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF34Q969K3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF34Q969K3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
RNF34Q969K3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF34Q969K3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF34Q969K3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RNF34Q969K3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF34Q969K3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF34Q969K3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF34Q969K3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
RNF34Q969K3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF34Q969K3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF34Q969K3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF34Q969K3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF34Q969K3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF34Q969K3 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF34Q969K3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
RNF34Q969K3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF34Q969K3 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.28■□□□□ 0.52
RNF34Q969K3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RNF34Q969K3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF34Q969K3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF34Q969K3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF34Q969K3 AC002558.1-201ENST00000488906 803 ntBASIC18.28■□□□□ 0.52
RNF34Q969K3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF34Q969K3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.28■□□□□ 0.52
RNF34Q969K3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF34Q969K3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF34Q969K3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RNF34Q969K3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF34Q969K3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF34Q969K3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF34Q969K3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF34Q969K3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF34Q969K3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.28■□□□□ 0.52
RNF34Q969K3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
RNF34Q969K3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF34Q969K3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF34Q969K3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF34Q969K3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF34Q969K3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF34Q969K3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RNF34Q969K3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RNF34Q969K3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF34Q969K3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF34Q969K3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF34Q969K3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF34Q969K3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.27■□□□□ 0.52
RNF34Q969K3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF34Q969K3 HLA-J-201ENST00000462773 1622 ntBASIC18.27■□□□□ 0.52
RNF34Q969K3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
RNF34Q969K3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.27■□□□□ 0.52
RNF34Q969K3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF34Q969K3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RNF34Q969K3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF34Q969K3 LINC00304-203ENST00000565008 1864 ntBASIC18.27■□□□□ 0.52
RNF34Q969K3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.27■□□□□ 0.52
RNF34Q969K3 AL049757.1-201ENST00000616842 1596 ntBASIC18.27■□□□□ 0.52
RNF34Q969K3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF34Q969K3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF34Q969K3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF34Q969K3 MYCLP1-201ENST00000372451 1075 ntBASIC18.27■□□□□ 0.52
RNF34Q969K3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF34Q969K3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF34Q969K3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.27■□□□□ 0.52
RNF34Q969K3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF34Q969K3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
RNF34Q969K3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.27■□□□□ 0.52
RNF34Q969K3 RN7SL510P-201ENST00000581311 263 ntBASIC18.27■□□□□ 0.52
RNF34Q969K3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF34Q969K3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF34Q969K3 AC019129.2-201ENST00000609837 1235 ntBASIC18.27■□□□□ 0.52
RNF34Q969K3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF34Q969K3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.27■□□□□ 0.52
RNF34Q969K3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF34Q969K3 AC073592.5-201ENST00000624854 528 ntBASIC18.27■□□□□ 0.52
RNF34Q969K3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.27■□□□□ 0.52
RNF34Q969K3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
RNF34Q969K3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF34Q969K3 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RNF34Q969K3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
RNF34Q969K3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.51
RNF34Q969K3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RNF34Q969K3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.27■□□□□ 0.51
RNF34Q969K3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF34Q969K3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
RNF34Q969K3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF34Q969K3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms