Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SIMC1Q8NDZ2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 AL121894.2-201ENST00000602977 491 ntBASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 AC008894.3-201ENST00000624324 3103 ntBASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SIMC1Q8NDZ2 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 AL645608.8-201ENST00000606034 2086 ntBASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 BX276092.7-203ENST00000637198 1536 ntBASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 COX5BP2-201ENST00000392354 334 ntBASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 Z69720.1-201ENST00000601483 472 ntBASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 HLA-J-201ENST00000462773 1622 ntBASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 TP73-AS1-210ENST00000637775 1455 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms