Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CCDC116Q8IYX3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CCDC116Q8IYX3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC116Q8IYX3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC116Q8IYX3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC116Q8IYX3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC116Q8IYX3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC116Q8IYX3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC116Q8IYX3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC116Q8IYX3 UPK3BP1-201ENST00000428678 509 ntBASIC16.49■□□□□ 0.23
CCDC116Q8IYX3 AC104819.1-201ENST00000504587 486 ntBASIC16.49■□□□□ 0.23
CCDC116Q8IYX3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.49■□□□□ 0.23
CCDC116Q8IYX3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.49■□□□□ 0.23
CCDC116Q8IYX3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CCDC116Q8IYX3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC116Q8IYX3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC116Q8IYX3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC116Q8IYX3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC116Q8IYX3 AC011467.2-201ENST00000598425 242 ntBASIC16.49■□□□□ 0.23
CCDC116Q8IYX3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC116Q8IYX3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CCDC116Q8IYX3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC116Q8IYX3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC116Q8IYX3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC116Q8IYX3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC116Q8IYX3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC116Q8IYX3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CCDC116Q8IYX3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC116Q8IYX3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CCDC116Q8IYX3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC116Q8IYX3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC116Q8IYX3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC116Q8IYX3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
CCDC116Q8IYX3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC116Q8IYX3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC116Q8IYX3 KRT8P10-201ENST00000450021 1447 ntBASIC16.48■□□□□ 0.23
CCDC116Q8IYX3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
CCDC116Q8IYX3 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.48■□□□□ 0.23
CCDC116Q8IYX3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CCDC116Q8IYX3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.48■□□□□ 0.23
CCDC116Q8IYX3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC116Q8IYX3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC116Q8IYX3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC116Q8IYX3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CCDC116Q8IYX3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC116Q8IYX3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.48■□□□□ 0.23
CCDC116Q8IYX3 AC096582.2-201ENST00000510860 516 ntBASIC16.48■□□□□ 0.23
CCDC116Q8IYX3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.48■□□□□ 0.23
CCDC116Q8IYX3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.48■□□□□ 0.23
CCDC116Q8IYX3 BNIP3P18-201ENST00000593976 575 ntBASIC16.48■□□□□ 0.23
CCDC116Q8IYX3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC116Q8IYX3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CCDC116Q8IYX3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CCDC116Q8IYX3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC116Q8IYX3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC116Q8IYX3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC116Q8IYX3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC116Q8IYX3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC116Q8IYX3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC116Q8IYX3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 MYCLP1-201ENST00000372451 1075 ntBASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 RCN1P2-201ENST00000398357 915 ntBASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 AC012615.1-201ENST00000565797 1299 ntBASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 AC111152.3-201ENST00000569699 673 ntBASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC116Q8IYX3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms