Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC65Q8IXS2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC65Q8IXS2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC65Q8IXS2 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC65Q8IXS2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC65Q8IXS2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC65Q8IXS2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC65Q8IXS2 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC65Q8IXS2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CCDC65Q8IXS2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC65Q8IXS2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC65Q8IXS2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
CCDC65Q8IXS2 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
CCDC65Q8IXS2 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC65Q8IXS2 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.39■□□□□ 0.7
CCDC65Q8IXS2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC65Q8IXS2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCDC65Q8IXS2 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCDC65Q8IXS2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCDC65Q8IXS2 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC65Q8IXS2 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC65Q8IXS2 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC65Q8IXS2 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC65Q8IXS2 NUS1P2-201ENST00000417358 873 ntBASIC19.39■□□□□ 0.69
CCDC65Q8IXS2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CCDC65Q8IXS2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.39■□□□□ 0.69
CCDC65Q8IXS2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC65Q8IXS2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC65Q8IXS2 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC65Q8IXS2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.39■□□□□ 0.69
CCDC65Q8IXS2 STK19B-204ENST00000512515 211 ntBASIC19.39■□□□□ 0.69
CCDC65Q8IXS2 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC65Q8IXS2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC65Q8IXS2 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CCDC65Q8IXS2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC65Q8IXS2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCDC65Q8IXS2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC65Q8IXS2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC65Q8IXS2 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC65Q8IXS2 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCDC65Q8IXS2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC65Q8IXS2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 AC003669.1-201ENST00000334569 611 ntBASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 HCG4P8-203ENST00000443049 980 ntBASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 MIR5100-201ENST00000579544 119 ntBASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 AC073592.5-201ENST00000624854 528 ntBASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC65Q8IXS2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CCDC65Q8IXS2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC65Q8IXS2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC65Q8IXS2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC65Q8IXS2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CCDC65Q8IXS2 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC65Q8IXS2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC65Q8IXS2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC65Q8IXS2 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC65Q8IXS2 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC65Q8IXS2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC65Q8IXS2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC65Q8IXS2 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC65Q8IXS2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms