Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AL589182.2-201ENST00000619332 1049 ntBASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 ZNF259P1-201ENST00000407656 1365 ntBASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 MIR574-201ENST00000385209 96 ntBASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 AC005104.2-201ENST00000427818 678 ntBASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 RNA5SP415-201ENST00000517246 115 ntBASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 AL356488.2-201ENST00000602755 427 ntBASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SCN4BQ8IWT1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCN4BQ8IWT1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCN4BQ8IWT1 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCN4BQ8IWT1 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.41■□□□□ 0.54
SCN4BQ8IWT1 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
SCN4BQ8IWT1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SCN4BQ8IWT1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCN4BQ8IWT1 AC097637.2-201ENST00000624096 1997 ntBASIC18.41■□□□□ 0.54
SCN4BQ8IWT1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCN4BQ8IWT1 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SCN4BQ8IWT1 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.41■□□□□ 0.54
SCN4BQ8IWT1 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SCN4BQ8IWT1 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SCN4BQ8IWT1 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.41■□□□□ 0.54
SCN4BQ8IWT1 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.41■□□□□ 0.54
SCN4BQ8IWT1 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.41■□□□□ 0.54
SCN4BQ8IWT1 AL671883.3-201ENST00000603274 991 ntBASIC18.41■□□□□ 0.54
SCN4BQ8IWT1 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.41■□□□□ 0.54
SCN4BQ8IWT1 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.41■□□□□ 0.54
SCN4BQ8IWT1 AC117500.6-201ENST00000624871 588 ntBASIC18.41■□□□□ 0.54
SCN4BQ8IWT1 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.41■□□□□ 0.54
SCN4BQ8IWT1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCN4BQ8IWT1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SCN4BQ8IWT1 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SCN4BQ8IWT1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCN4BQ8IWT1 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
SCN4BQ8IWT1 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCN4BQ8IWT1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SCN4BQ8IWT1 NCF1C-201ENST00000438382 1427 ntBASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 AC006116.8-202ENST00000587620 1550 ntBASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 PMS2P1-201ENST00000431037 1228 ntBASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.4■□□□□ 0.54
SCN4BQ8IWT1 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms