Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 AC134043.2-201ENST00000624206 2238 ntBASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC60Q8IWA6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 AC064836.3-201ENST00000607928 673 ntBASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC60Q8IWA6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 AC004790.2-201ENST00000623588 572 ntBASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC60Q8IWA6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.33■□□□□ 0.69
CCDC60Q8IWA6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC60Q8IWA6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC60Q8IWA6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC60Q8IWA6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.33■□□□□ 0.69
CCDC60Q8IWA6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CCDC60Q8IWA6 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC60Q8IWA6 AP002414.1-201ENST00000391405 1147 ntBASIC19.33■□□□□ 0.68
CCDC60Q8IWA6 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms