Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFX6Q8HWS3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFX6Q8HWS3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.19■□□□□ 0.5
RFX6Q8HWS3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFX6Q8HWS3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFX6Q8HWS3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.18■□□□□ 0.5
RFX6Q8HWS3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFX6Q8HWS3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFX6Q8HWS3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFX6Q8HWS3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.18■□□□□ 0.5
RFX6Q8HWS3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.18■□□□□ 0.5
RFX6Q8HWS3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.18■□□□□ 0.5
RFX6Q8HWS3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFX6Q8HWS3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFX6Q8HWS3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.18■□□□□ 0.5
RFX6Q8HWS3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFX6Q8HWS3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFX6Q8HWS3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFX6Q8HWS3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFX6Q8HWS3 FAM210CP-201ENST00000445714 574 ntBASIC18.18■□□□□ 0.5
RFX6Q8HWS3 FAM86EP-206ENST00000510506 987 ntBASIC18.18■□□□□ 0.5
RFX6Q8HWS3 IGHV3-52-201ENST00000519770 353 ntBASIC18.18■□□□□ 0.5
RFX6Q8HWS3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.18■□□□□ 0.5
RFX6Q8HWS3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.18■□□□□ 0.5
RFX6Q8HWS3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.18■□□□□ 0.5
RFX6Q8HWS3 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.18■□□□□ 0.5
RFX6Q8HWS3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.18■□□□□ 0.5
RFX6Q8HWS3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFX6Q8HWS3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
RFX6Q8HWS3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.18■□□□□ 0.5
RFX6Q8HWS3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.18■□□□□ 0.5
RFX6Q8HWS3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFX6Q8HWS3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFX6Q8HWS3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
RFX6Q8HWS3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFX6Q8HWS3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RFX6Q8HWS3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.18■□□□□ 0.5
RFX6Q8HWS3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFX6Q8HWS3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFX6Q8HWS3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX6Q8HWS3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFX6Q8HWS3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFX6Q8HWS3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
RFX6Q8HWS3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX6Q8HWS3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX6Q8HWS3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RFX6Q8HWS3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.17■□□□□ 0.5
RFX6Q8HWS3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.17■□□□□ 0.5
RFX6Q8HWS3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.17■□□□□ 0.5
RFX6Q8HWS3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.17■□□□□ 0.5
RFX6Q8HWS3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
RFX6Q8HWS3 AL138831.2-201ENST00000606564 490 ntBASIC18.17■□□□□ 0.5
RFX6Q8HWS3 AC019129.2-201ENST00000609837 1235 ntBASIC18.17■□□□□ 0.5
RFX6Q8HWS3 AL353801.3-201ENST00000609898 542 ntBASIC18.17■□□□□ 0.5
RFX6Q8HWS3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RFX6Q8HWS3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.17■□□□□ 0.5
RFX6Q8HWS3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFX6Q8HWS3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFX6Q8HWS3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFX6Q8HWS3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
RFX6Q8HWS3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.17■□□□□ 0.5
RFX6Q8HWS3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.17■□□□□ 0.5
RFX6Q8HWS3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX6Q8HWS3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RFX6Q8HWS3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RFX6Q8HWS3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX6Q8HWS3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX6Q8HWS3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.16■□□□□ 0.5
RFX6Q8HWS3 AC022211.2-201ENST00000585075 2527 ntBASIC18.16■□□□□ 0.5
RFX6Q8HWS3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX6Q8HWS3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RFX6Q8HWS3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX6Q8HWS3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFX6Q8HWS3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX6Q8HWS3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.16■□□□□ 0.5
RFX6Q8HWS3 CHCHD2P8-201ENST00000429873 447 ntBASIC18.16■□□□□ 0.5
RFX6Q8HWS3 VENTXP7-201ENST00000475503 772 ntBASIC18.16■□□□□ 0.5
RFX6Q8HWS3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX6Q8HWS3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.16■□□□□ 0.5
RFX6Q8HWS3 AC087388.1-201ENST00000571370 1112 ntBASIC18.16■□□□□ 0.5
RFX6Q8HWS3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.16■□□□□ 0.5
RFX6Q8HWS3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.16■□□□□ 0.5
RFX6Q8HWS3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RFX6Q8HWS3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RFX6Q8HWS3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RFX6Q8HWS3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.16■□□□□ 0.5
RFX6Q8HWS3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFX6Q8HWS3 AD000864.1-201ENST00000624076 2295 ntBASIC18.16■□□□□ 0.5
RFX6Q8HWS3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFX6Q8HWS3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.16■□□□□ 0.5
RFX6Q8HWS3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFX6Q8HWS3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX6Q8HWS3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.16■□□□□ 0.5
RFX6Q8HWS3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.16■□□□□ 0.5
RFX6Q8HWS3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.16■□□□□ 0.5
RFX6Q8HWS3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFX6Q8HWS3 AC016734.2-201ENST00000624325 1377 ntBASIC18.16■□□□□ 0.5
RFX6Q8HWS3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX6Q8HWS3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFX6Q8HWS3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms