Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.83■□□□□ 0.12
SHFQ7M4L6 AC024563.2-201ENST00000603282 481 ntBASIC15.83■□□□□ 0.12
SHFQ7M4L6 AC141257.4-201ENST00000634557 245 ntBASIC15.83■□□□□ 0.12
SHFQ7M4L6 AC136944.6-201ENST00000634818 245 ntBASIC15.83■□□□□ 0.12
SHFQ7M4L6 AL356309.3-201ENST00000624132 1934 ntBASIC15.83■□□□□ 0.12
SHFQ7M4L6 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHFQ7M4L6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SHFQ7M4L6 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
SHFQ7M4L6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
SHFQ7M4L6 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHFQ7M4L6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHFQ7M4L6 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.83■□□□□ 0.12
SHFQ7M4L6 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHFQ7M4L6 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHFQ7M4L6 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SHFQ7M4L6 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SHFQ7M4L6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHFQ7M4L6 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.83■□□□□ 0.12
SHFQ7M4L6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.83■□□□□ 0.12
SHFQ7M4L6 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SHFQ7M4L6 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.83■□□□□ 0.12
SHFQ7M4L6 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHFQ7M4L6 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHFQ7M4L6 AL391005.1-201ENST00000623953 2435 ntBASIC15.83■□□□□ 0.12
SHFQ7M4L6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.83■□□□□ 0.12
SHFQ7M4L6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHFQ7M4L6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHFQ7M4L6 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.82■□□□□ 0.12
SHFQ7M4L6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SHFQ7M4L6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
SHFQ7M4L6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.82■□□□□ 0.12
SHFQ7M4L6 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 KRT18P65-201ENST00000439811 1286 ntBASIC15.82■□□□□ 0.12
SHFQ7M4L6 DDX43P3-201ENST00000441064 443 ntBASIC15.82■□□□□ 0.12
SHFQ7M4L6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.82■□□□□ 0.12
SHFQ7M4L6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
SHFQ7M4L6 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.82■□□□□ 0.12
SHFQ7M4L6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.82■□□□□ 0.12
SHFQ7M4L6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.82■□□□□ 0.12
SHFQ7M4L6 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.82■□□□□ 0.12
SHFQ7M4L6 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
SHFQ7M4L6 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
SHFQ7M4L6 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SHFQ7M4L6 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SHFQ7M4L6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHFQ7M4L6 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.82■□□□□ 0.12
SHFQ7M4L6 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
SHFQ7M4L6 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHFQ7M4L6 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHFQ7M4L6 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHFQ7M4L6 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHFQ7M4L6 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHFQ7M4L6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHFQ7M4L6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.81■□□□□ 0.12
SHFQ7M4L6 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.81■□□□□ 0.12
SHFQ7M4L6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SHFQ7M4L6 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHFQ7M4L6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHFQ7M4L6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHFQ7M4L6 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SHFQ7M4L6 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHFQ7M4L6 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHFQ7M4L6 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SHFQ7M4L6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.81■□□□□ 0.12
SHFQ7M4L6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.81■□□□□ 0.12
SHFQ7M4L6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.81■□□□□ 0.12
SHFQ7M4L6 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.81■□□□□ 0.12
SHFQ7M4L6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.81■□□□□ 0.12
SHFQ7M4L6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms