Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 PKD1P5-201ENST00000532415 10291 ntBASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 AC016396.2-201ENST00000562575 1417 ntBASIC16.11■□□□□ 0.17
PTCHD4Q6ZW05 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 KRT18P22-201ENST00000402024 1347 ntBASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 AC008894.3-201ENST00000624324 3103 ntBASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PTCHD4Q6ZW05 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 DDX43P3-201ENST00000441064 443 ntBASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 AL138966.2-201ENST00000621997 464 ntBASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 AC141257.4-201ENST00000634557 245 ntBASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 AC136944.6-201ENST00000634818 245 ntBASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 PCDH8P1-201ENST00000428983 2773 ntBASIC16.09■□□□□ 0.17
PTCHD4Q6ZW05 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
PTCHD4Q6ZW05 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PTCHD4Q6ZW05 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
PTCHD4Q6ZW05 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms