Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 AC092384.3-202ENST00000564646 2873 ntBASIC16.49■□□□□ 0.23
LPCAT4Q643R3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 NIFKP9-201ENST00000419265 221 ntBASIC16.49■□□□□ 0.23
LPCAT4Q643R3 KRT18P23-201ENST00000435622 1283 ntBASIC16.49■□□□□ 0.23
LPCAT4Q643R3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 RPS2P4-201ENST00000476944 856 ntBASIC16.49■□□□□ 0.23
LPCAT4Q643R3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 HOXB1-202ENST00000577092 1414 ntBASIC16.49■□□□□ 0.23
LPCAT4Q643R3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 AC104640.1-201ENST00000562617 2109 ntBASIC16.49■□□□□ 0.23
LPCAT4Q643R3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 LINC02228-204ENST00000642115 2962 ntBASIC16.48■□□□□ 0.23
LPCAT4Q643R3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 KRT16P5-201ENST00000455284 522 ntBASIC16.48■□□□□ 0.23
LPCAT4Q643R3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LPCAT4Q643R3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LPCAT4Q643R3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LPCAT4Q643R3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.47■□□□□ 0.23
LPCAT4Q643R3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LPCAT4Q643R3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LPCAT4Q643R3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LPCAT4Q643R3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LPCAT4Q643R3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LPCAT4Q643R3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms