Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC087641.1-201ENST00000557561 1021 ntBASIC26.12■■□□□ 1.77
CDC42BPAQ5VT25 MIR3909-201ENST00000579518 119 ntBASIC26.12■■□□□ 1.77
CDC42BPAQ5VT25 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC26.12■■□□□ 1.77
CDC42BPAQ5VT25 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC26.12■■□□□ 1.77
CDC42BPAQ5VT25 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC26.12■■□□□ 1.77
CDC42BPAQ5VT25 PODN-203ENST00000395871 2744 ntTSL 5 BASIC26.12■■□□□ 1.77
CDC42BPAQ5VT25 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
CDC42BPAQ5VT25 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CDC42BPAQ5VT25 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CDC42BPAQ5VT25 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
CDC42BPAQ5VT25 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC26.12■■□□□ 1.77
CDC42BPAQ5VT25 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CDC42BPAQ5VT25 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CDC42BPAQ5VT25 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC26.12■■□□□ 1.77
CDC42BPAQ5VT25 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CDC42BPAQ5VT25 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC26.12■■□□□ 1.77
CDC42BPAQ5VT25 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CDC42BPAQ5VT25 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CDC42BPAQ5VT25 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CDC42BPAQ5VT25 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
CDC42BPAQ5VT25 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CDC42BPAQ5VT25 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CDC42BPAQ5VT25 RPL30-202ENST00000396070 440 ntTSL 2 BASIC26.11■■□□□ 1.77
CDC42BPAQ5VT25 AC236430.1-201ENST00000402231 743 ntBASIC26.11■■□□□ 1.77
CDC42BPAQ5VT25 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC26.11■■□□□ 1.77
CDC42BPAQ5VT25 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
CDC42BPAQ5VT25 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CDC42BPAQ5VT25 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC26.11■■□□□ 1.77
CDC42BPAQ5VT25 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CDC42BPAQ5VT25 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC26.11■■□□□ 1.77
CDC42BPAQ5VT25 AL512356.2-201ENST00000546955 174 ntBASIC26.11■■□□□ 1.77
CDC42BPAQ5VT25 AC140878.1-201ENST00000565277 250 ntBASIC26.11■■□□□ 1.77
CDC42BPAQ5VT25 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
CDC42BPAQ5VT25 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CDC42BPAQ5VT25 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CDC42BPAQ5VT25 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CDC42BPAQ5VT25 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CDC42BPAQ5VT25 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC26.11■■□□□ 1.77
CDC42BPAQ5VT25 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CDC42BPAQ5VT25 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
CDC42BPAQ5VT25 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
CDC42BPAQ5VT25 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CDC42BPAQ5VT25 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CDC42BPAQ5VT25 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CDC42BPAQ5VT25 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC26.1■■□□□ 1.77
CDC42BPAQ5VT25 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CDC42BPAQ5VT25 SPCS2P4-201ENST00000436160 681 ntBASIC26.1■■□□□ 1.77
CDC42BPAQ5VT25 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CDC42BPAQ5VT25 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC26.1■■□□□ 1.77
CDC42BPAQ5VT25 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC26.1■■□□□ 1.77
CDC42BPAQ5VT25 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CDC42BPAQ5VT25 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC26.1■■□□□ 1.77
CDC42BPAQ5VT25 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC26.1■■□□□ 1.77
CDC42BPAQ5VT25 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC26.1■■□□□ 1.77
CDC42BPAQ5VT25 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC26.1■■□□□ 1.77
CDC42BPAQ5VT25 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CDC42BPAQ5VT25 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC26.09■■□□□ 1.77
CDC42BPAQ5VT25 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
CDC42BPAQ5VT25 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC26.09■■□□□ 1.77
CDC42BPAQ5VT25 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC26.09■■□□□ 1.77
CDC42BPAQ5VT25 COPE-202ENST00000349893 948 ntTSL 2 BASIC26.09■■□□□ 1.77
CDC42BPAQ5VT25 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC26.09■■□□□ 1.77
CDC42BPAQ5VT25 AC092580.3-201ENST00000430932 139 ntBASIC26.09■■□□□ 1.77
CDC42BPAQ5VT25 PNKD-204ENST00000436005 978 ntTSL 5 BASIC26.09■■□□□ 1.77
CDC42BPAQ5VT25 MIR4745-201ENST00000577608 62 ntBASIC26.09■■□□□ 1.77
CDC42BPAQ5VT25 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC26.09■■□□□ 1.77
CDC42BPAQ5VT25 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC26.09■■□□□ 1.77
CDC42BPAQ5VT25 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CDC42BPAQ5VT25 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
CDC42BPAQ5VT25 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC26.09■■□□□ 1.77
CDC42BPAQ5VT25 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CDC42BPAQ5VT25 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC26.09■■□□□ 1.77
CDC42BPAQ5VT25 SLC22A20-204ENST00000530038 1673 ntBASIC26.09■■□□□ 1.77
CDC42BPAQ5VT25 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CDC42BPAQ5VT25 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC26.09■■□□□ 1.77
CDC42BPAQ5VT25 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CDC42BPAQ5VT25 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC26.09■■□□□ 1.77
CDC42BPAQ5VT25 BAD-202ENST00000394531 631 ntTSL 3 BASIC26.08■■□□□ 1.77
CDC42BPAQ5VT25 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC26.08■■□□□ 1.77
CDC42BPAQ5VT25 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC26.08■■□□□ 1.77
CDC42BPAQ5VT25 AC002472.2-201ENST00000442739 958 ntBASIC26.08■■□□□ 1.77
CDC42BPAQ5VT25 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC26.08■■□□□ 1.77
CDC42BPAQ5VT25 AC125807.1-201ENST00000483097 614 ntBASIC26.08■■□□□ 1.77
CDC42BPAQ5VT25 BAD-207ENST00000544785 525 ntTSL 3 BASIC26.08■■□□□ 1.77
CDC42BPAQ5VT25 AL031055.1-201ENST00000606362 631 ntBASIC26.08■■□□□ 1.77
CDC42BPAQ5VT25 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CDC42BPAQ5VT25 RAB34-224ENST00000636513 888 ntTSL 5 BASIC26.08■■□□□ 1.77
CDC42BPAQ5VT25 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC26.08■■□□□ 1.77
CDC42BPAQ5VT25 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CDC42BPAQ5VT25 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CDC42BPAQ5VT25 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CDC42BPAQ5VT25 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CDC42BPAQ5VT25 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC26.08■■□□□ 1.77
CDC42BPAQ5VT25 GNAS-203ENST00000306120 1878 ntBASIC26.08■■□□□ 1.77
CDC42BPAQ5VT25 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CDC42BPAQ5VT25 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC26.08■■□□□ 1.77
CDC42BPAQ5VT25 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
CDC42BPAQ5VT25 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.76
CDC42BPAQ5VT25 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.76
CDC42BPAQ5VT25 RNU1-129P-201ENST00000384064 167 ntBASIC26.08■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms