Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC087163.2-201ENST00000457299 853 ntBASIC14.99□□□□□ -0.01
LRRK2Q5S007 RNA5SP423-201ENST00000517127 109 ntBASIC14.99□□□□□ -0.01
LRRK2Q5S007 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRRK2Q5S007 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRRK2Q5S007 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.99□□□□□ -0.01
LRRK2Q5S007 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.99□□□□□ -0.01
LRRK2Q5S007 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.99□□□□□ -0.01
LRRK2Q5S007 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
LRRK2Q5S007 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC14.99□□□□□ -0.01
LRRK2Q5S007 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LRRK2Q5S007 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LRRK2Q5S007 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRK2Q5S007 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRK2Q5S007 AC022210.1-201ENST00000449856 793 ntBASIC14.98□□□□□ -0.01
LRRK2Q5S007 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC14.98□□□□□ -0.01
LRRK2Q5S007 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.98□□□□□ -0.01
LRRK2Q5S007 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.98□□□□□ -0.01
LRRK2Q5S007 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.98□□□□□ -0.01
LRRK2Q5S007 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.98□□□□□ -0.01
LRRK2Q5S007 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.98□□□□□ -0.01
LRRK2Q5S007 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRK2Q5S007 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.98□□□□□ -0.01
LRRK2Q5S007 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRRK2Q5S007 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.98□□□□□ -0.01
LRRK2Q5S007 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRK2Q5S007 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRRK2Q5S007 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC14.98□□□□□ -0.01
LRRK2Q5S007 AC009949.1-201ENST00000623048 1830 ntBASIC14.98□□□□□ -0.01
LRRK2Q5S007 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LRRK2Q5S007 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LRRK2Q5S007 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.98□□□□□ -0.01
LRRK2Q5S007 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRK2Q5S007 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.98□□□□□ -0.01
LRRK2Q5S007 AC007389.4-201ENST00000454674 793 ntBASIC14.98□□□□□ -0.01
LRRK2Q5S007 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
LRRK2Q5S007 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRRK2Q5S007 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRRK2Q5S007 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
LRRK2Q5S007 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
LRRK2Q5S007 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRK2Q5S007 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRK2Q5S007 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.97□□□□□ -0.01
LRRK2Q5S007 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRRK2Q5S007 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
LRRK2Q5S007 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRRK2Q5S007 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRK2Q5S007 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.97□□□□□ -0.01
LRRK2Q5S007 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
LRRK2Q5S007 TMEM14DP-201ENST00000422205 345 ntBASIC14.97□□□□□ -0.01
LRRK2Q5S007 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.97□□□□□ -0.01
LRRK2Q5S007 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRRK2Q5S007 AC109635.5-201ENST00000533593 962 ntBASIC14.97□□□□□ -0.01
LRRK2Q5S007 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.97□□□□□ -0.01
LRRK2Q5S007 AL161645.1-201ENST00000622716 1255 ntBASIC14.97□□□□□ -0.01
LRRK2Q5S007 AL139099.5-201ENST00000635274 300 ntBASIC14.97□□□□□ -0.01
LRRK2Q5S007 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRRK2Q5S007 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRK2Q5S007 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.97□□□□□ -0.01
LRRK2Q5S007 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC14.97□□□□□ -0.01
LRRK2Q5S007 AC020907.1-201ENST00000616460 1350 ntBASIC14.97□□□□□ -0.01
LRRK2Q5S007 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRK2Q5S007 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
LRRK2Q5S007 AC007541.1-201ENST00000570282 1469 ntBASIC14.97□□□□□ -0.01
LRRK2Q5S007 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRK2Q5S007 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRK2Q5S007 MIR346-201ENST00000362234 95 ntBASIC14.97□□□□□ -0.01
LRRK2Q5S007 MYCLP1-201ENST00000372451 1075 ntBASIC14.97□□□□□ -0.01
LRRK2Q5S007 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.97□□□□□ -0.01
LRRK2Q5S007 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.97□□□□□ -0.01
LRRK2Q5S007 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.97□□□□□ -0.01
LRRK2Q5S007 AL009183.1-201ENST00000603760 355 ntBASIC14.97□□□□□ -0.01
LRRK2Q5S007 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.97□□□□□ -0.01
LRRK2Q5S007 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRK2Q5S007 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.97□□□□□ -0.01
LRRK2Q5S007 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRRK2Q5S007 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRK2Q5S007 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRK2Q5S007 KRT8P44-201ENST00000441609 1350 ntBASIC14.96□□□□□ -0.01
LRRK2Q5S007 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LRRK2Q5S007 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRK2Q5S007 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LRRK2Q5S007 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LRRK2Q5S007 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LRRK2Q5S007 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRK2Q5S007 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRK2Q5S007 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LRRK2Q5S007 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.96□□□□□ -0.01
LRRK2Q5S007 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.96□□□□□ -0.01
LRRK2Q5S007 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
LRRK2Q5S007 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.96□□□□□ -0.01
LRRK2Q5S007 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.96□□□□□ -0.01
LRRK2Q5S007 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.96□□□□□ -0.01
LRRK2Q5S007 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
LRRK2Q5S007 AC003101.2-201ENST00000612557 442 ntBASIC14.96□□□□□ -0.01
LRRK2Q5S007 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRK2Q5S007 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRK2Q5S007 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRK2Q5S007 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LRRK2Q5S007 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LRRK2Q5S007 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms