Protein–RNA interactions for Protein: Q12805

EFEMP1, EGF-containing fibulin-like extracellular matrix protein 1, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1Q12805 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.16■□□□□ 0.5
EFEMP1Q12805 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFEMP1Q12805 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
EFEMP1Q12805 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
EFEMP1Q12805 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFEMP1Q12805 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
EFEMP1Q12805 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFEMP1Q12805 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.16■□□□□ 0.5
EFEMP1Q12805 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.16■□□□□ 0.5
EFEMP1Q12805 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.16■□□□□ 0.5
EFEMP1Q12805 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.16■□□□□ 0.5
EFEMP1Q12805 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.16■□□□□ 0.5
EFEMP1Q12805 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.16■□□□□ 0.5
EFEMP1Q12805 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.16■□□□□ 0.5
EFEMP1Q12805 AC105339.3-201ENST00000560043 636 ntBASIC18.16■□□□□ 0.5
EFEMP1Q12805 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.16■□□□□ 0.5
EFEMP1Q12805 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.16■□□□□ 0.5
EFEMP1Q12805 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.16■□□□□ 0.5
EFEMP1Q12805 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.16■□□□□ 0.5
EFEMP1Q12805 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFEMP1Q12805 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
EFEMP1Q12805 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFEMP1Q12805 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFEMP1Q12805 RNF165-205ENST00000588679 2904 ntBASIC18.16■□□□□ 0.5
EFEMP1Q12805 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.15■□□□□ 0.5
EFEMP1Q12805 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
EFEMP1Q12805 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EFEMP1Q12805 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
EFEMP1Q12805 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EFEMP1Q12805 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
EFEMP1Q12805 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
EFEMP1Q12805 AP002414.3-201ENST00000589352 1468 ntBASIC18.15■□□□□ 0.5
EFEMP1Q12805 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EFEMP1Q12805 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EFEMP1Q12805 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
EFEMP1Q12805 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.15■□□□□ 0.5
EFEMP1Q12805 AC046185.3-201ENST00000623228 1824 ntBASIC18.15■□□□□ 0.5
EFEMP1Q12805 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.15■□□□□ 0.5
EFEMP1Q12805 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.15■□□□□ 0.5
EFEMP1Q12805 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.15■□□□□ 0.5
EFEMP1Q12805 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.15■□□□□ 0.5
EFEMP1Q12805 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.15■□□□□ 0.5
EFEMP1Q12805 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
EFEMP1Q12805 AL139327.4-201ENST00000612362 153 ntBASIC18.15■□□□□ 0.5
EFEMP1Q12805 AL589182.2-201ENST00000619332 1049 ntBASIC18.15■□□□□ 0.5
EFEMP1Q12805 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
EFEMP1Q12805 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
EFEMP1Q12805 AC097637.2-201ENST00000624096 1997 ntBASIC18.15■□□□□ 0.5
EFEMP1Q12805 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EFEMP1Q12805 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
EFEMP1Q12805 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EFEMP1Q12805 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EFEMP1Q12805 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
EFEMP1Q12805 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
EFEMP1Q12805 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
EFEMP1Q12805 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
EFEMP1Q12805 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
EFEMP1Q12805 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
EFEMP1Q12805 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EFEMP1Q12805 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
EFEMP1Q12805 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
EFEMP1Q12805 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
EFEMP1Q12805 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EFEMP1Q12805 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.14■□□□□ 0.49
EFEMP1Q12805 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.14■□□□□ 0.49
EFEMP1Q12805 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.14■□□□□ 0.49
EFEMP1Q12805 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.14■□□□□ 0.49
EFEMP1Q12805 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.14■□□□□ 0.49
EFEMP1Q12805 SLC25A1P1-201ENST00000528351 927 ntBASIC18.14■□□□□ 0.49
EFEMP1Q12805 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.14■□□□□ 0.49
EFEMP1Q12805 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EFEMP1Q12805 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.14■□□□□ 0.49
EFEMP1Q12805 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.14■□□□□ 0.49
EFEMP1Q12805 AL133373.2-201ENST00000623187 2828 ntBASIC18.14■□□□□ 0.49
EFEMP1Q12805 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EFEMP1Q12805 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EFEMP1Q12805 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EFEMP1Q12805 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
EFEMP1Q12805 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.14■□□□□ 0.49
EFEMP1Q12805 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EFEMP1Q12805 NCF1C-201ENST00000438382 1427 ntBASIC18.14■□□□□ 0.49
EFEMP1Q12805 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
EFEMP1Q12805 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EFEMP1Q12805 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EFEMP1Q12805 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.13■□□□□ 0.49
EFEMP1Q12805 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
EFEMP1Q12805 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.13■□□□□ 0.49
EFEMP1Q12805 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EFEMP1Q12805 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.13■□□□□ 0.49
EFEMP1Q12805 AC133963.1-201ENST00000504166 1679 ntBASIC18.13■□□□□ 0.49
EFEMP1Q12805 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
EFEMP1Q12805 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
EFEMP1Q12805 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EFEMP1Q12805 AC098831.1-202ENST00000438821 336 ntBASIC18.13■□□□□ 0.49
EFEMP1Q12805 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.13■□□□□ 0.49
EFEMP1Q12805 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.13■□□□□ 0.49
EFEMP1Q12805 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.13■□□□□ 0.49
EFEMP1Q12805 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EFEMP1Q12805 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.13■□□□□ 0.49
EFEMP1Q12805 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms