Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCL20P78556 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.78□□□□□ -0.2
CCL20P78556 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCL20P78556 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCL20P78556 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCL20P78556 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCL20P78556 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCL20P78556 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCL20P78556 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCL20P78556 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL20P78556 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL20P78556 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL20P78556 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL20P78556 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL20P78556 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL20P78556 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL20P78556 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL20P78556 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CCL20P78556 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL20P78556 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CCL20P78556 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CCL20P78556 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL20P78556 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL20P78556 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CCL20P78556 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CCL20P78556 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL20P78556 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL20P78556 SLC25A1P3-201ENST00000395415 828 ntBASIC13.77□□□□□ -0.21
CCL20P78556 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC13.77□□□□□ -0.21
CCL20P78556 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL20P78556 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.77□□□□□ -0.21
CCL20P78556 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CCL20P78556 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC13.77□□□□□ -0.21
CCL20P78556 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL20P78556 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC13.77□□□□□ -0.21
CCL20P78556 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.77□□□□□ -0.21
CCL20P78556 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC13.77□□□□□ -0.21
CCL20P78556 AC097658.1-201ENST00000475555 843 ntBASIC13.77□□□□□ -0.21
CCL20P78556 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC13.77□□□□□ -0.21
CCL20P78556 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC13.77□□□□□ -0.21
CCL20P78556 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CCL20P78556 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC13.77□□□□□ -0.21
CCL20P78556 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CCL20P78556 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL20P78556 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC13.77□□□□□ -0.21
CCL20P78556 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CCL20P78556 MYC-209ENST00000641252 345 ntBASIC13.77□□□□□ -0.21
CCL20P78556 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL20P78556 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
CCL20P78556 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL20P78556 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL20P78556 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL20P78556 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL20P78556 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.76□□□□□ -0.21
CCL20P78556 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.76□□□□□ -0.21
CCL20P78556 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL20P78556 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL20P78556 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL20P78556 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC13.76□□□□□ -0.21
CCL20P78556 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCL20P78556 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL20P78556 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL20P78556 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.76□□□□□ -0.21
CCL20P78556 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL20P78556 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL20P78556 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL20P78556 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC13.76□□□□□ -0.21
CCL20P78556 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL20P78556 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.76□□□□□ -0.21
CCL20P78556 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL20P78556 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCL20P78556 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC13.76□□□□□ -0.21
CCL20P78556 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL20P78556 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
CCL20P78556 MIR638-201ENST00000385237 100 ntBASIC13.76□□□□□ -0.21
CCL20P78556 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.76□□□□□ -0.21
CCL20P78556 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC13.76□□□□□ -0.21
CCL20P78556 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC13.76□□□□□ -0.21
CCL20P78556 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCL20P78556 MIR3180-5-201ENST00000583743 153 ntBASIC13.76□□□□□ -0.21
CCL20P78556 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CCL20P78556 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL20P78556 AC011298.2-201ENST00000617989 482 ntBASIC13.76□□□□□ -0.21
CCL20P78556 ABBA01031674.1-201ENST00000635145 728 ntBASIC13.76□□□□□ -0.21
CCL20P78556 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CCL20P78556 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.76□□□□□ -0.21
CCL20P78556 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL20P78556 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCL20P78556 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CCL20P78556 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCL20P78556 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CCL20P78556 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CCL20P78556 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL20P78556 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL20P78556 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL20P78556 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CCL20P78556 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCL20P78556 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CCL20P78556 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL20P78556 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms