Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA4P78363 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA4P78363 ACTG1P14-201ENST00000446382 1122 ntBASIC14.99□□□□□ -0.01
ABCA4P78363 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.99□□□□□ -0.01
ABCA4P78363 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.99□□□□□ -0.01
ABCA4P78363 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA4P78363 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.99□□□□□ -0.01
ABCA4P78363 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.99□□□□□ -0.01
ABCA4P78363 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.99□□□□□ -0.01
ABCA4P78363 AC010507.1-201ENST00000633895 436 ntBASIC14.99□□□□□ -0.01
ABCA4P78363 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA4P78363 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA4P78363 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCA4P78363 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCA4P78363 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCA4P78363 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCA4P78363 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.98□□□□□ -0.01
ABCA4P78363 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC14.98□□□□□ -0.01
ABCA4P78363 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
ABCA4P78363 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.98□□□□□ -0.01
ABCA4P78363 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ABCA4P78363 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
ABCA4P78363 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.98□□□□□ -0.01
ABCA4P78363 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
ABCA4P78363 AP002414.1-201ENST00000391405 1147 ntBASIC14.98□□□□□ -0.01
ABCA4P78363 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ABCA4P78363 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.98□□□□□ -0.01
ABCA4P78363 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.98□□□□□ -0.01
ABCA4P78363 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.98□□□□□ -0.01
ABCA4P78363 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.98□□□□□ -0.01
ABCA4P78363 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCA4P78363 MIR4751-201ENST00000578027 74 ntBASIC14.98□□□□□ -0.01
ABCA4P78363 AC012645.4-201ENST00000610691 1061 ntBASIC14.98□□□□□ -0.01
ABCA4P78363 REXO1L9P-201ENST00000604264 2108 ntBASIC14.98□□□□□ -0.01
ABCA4P78363 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.98□□□□□ -0.01
ABCA4P78363 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.98□□□□□ -0.01
ABCA4P78363 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCA4P78363 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC14.98□□□□□ -0.01
ABCA4P78363 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCA4P78363 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ABCA4P78363 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
ABCA4P78363 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCA4P78363 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
ABCA4P78363 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCA4P78363 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
ABCA4P78363 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.97□□□□□ -0.01
ABCA4P78363 IGLL3P-201ENST00000412472 434 ntBASIC14.97□□□□□ -0.01
ABCA4P78363 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.97□□□□□ -0.01
ABCA4P78363 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.97□□□□□ -0.01
ABCA4P78363 AP000344.2-201ENST00000512987 629 ntBASIC14.97□□□□□ -0.01
ABCA4P78363 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.97□□□□□ -0.01
ABCA4P78363 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.97□□□□□ -0.01
ABCA4P78363 AC004706.3-202ENST00000621574 984 ntBASIC14.97□□□□□ -0.01
ABCA4P78363 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.97□□□□□ -0.01
ABCA4P78363 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA4P78363 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
ABCA4P78363 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.97□□□□□ -0.01
ABCA4P78363 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA4P78363 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ABCA4P78363 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA4P78363 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
ABCA4P78363 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA4P78363 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA4P78363 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.97□□□□□ -0.01
ABCA4P78363 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA4P78363 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA4P78363 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA4P78363 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA4P78363 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA4P78363 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA4P78363 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA4P78363 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA4P78363 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA4P78363 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA4P78363 ADH5P3-201ENST00000433842 1137 ntBASIC14.97□□□□□ -0.01
ABCA4P78363 RPS15P9-201ENST00000494093 319 ntBASIC14.97□□□□□ -0.01
ABCA4P78363 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.97□□□□□ -0.01
ABCA4P78363 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.97□□□□□ -0.01
ABCA4P78363 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.97□□□□□ -0.01
ABCA4P78363 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA4P78363 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
ABCA4P78363 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
ABCA4P78363 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA4P78363 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCA4P78363 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ABCA4P78363 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ABCA4P78363 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ABCA4P78363 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ABCA4P78363 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
ABCA4P78363 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ABCA4P78363 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ABCA4P78363 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.96□□□□□ -0.01
ABCA4P78363 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.96□□□□□ -0.01
ABCA4P78363 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ABCA4P78363 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.96□□□□□ -0.01
ABCA4P78363 AC096734.2-201ENST00000562054 433 ntBASIC14.96□□□□□ -0.01
ABCA4P78363 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ABCA4P78363 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ABCA4P78363 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
ABCA4P78363 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms