Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
YBX1P67809 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
YBX1P67809 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
YBX1P67809 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
YBX1P67809 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
YBX1P67809 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
YBX1P67809 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
YBX1P67809 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.03■□□□□ 0.32
YBX1P67809 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.03■□□□□ 0.32
YBX1P67809 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
YBX1P67809 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
YBX1P67809 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
YBX1P67809 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.03■□□□□ 0.32
YBX1P67809 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
YBX1P67809 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
YBX1P67809 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
YBX1P67809 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
YBX1P67809 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
YBX1P67809 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
YBX1P67809 DDX43P3-201ENST00000441064 443 ntBASIC17.03■□□□□ 0.32
YBX1P67809 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.03■□□□□ 0.32
YBX1P67809 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
YBX1P67809 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
YBX1P67809 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.03■□□□□ 0.32
YBX1P67809 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
YBX1P67809 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
YBX1P67809 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
YBX1P67809 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.03■□□□□ 0.32
YBX1P67809 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
YBX1P67809 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
YBX1P67809 AC018695.7-201ENST00000624587 2492 ntBASIC17.03■□□□□ 0.32
YBX1P67809 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.03■□□□□ 0.32
YBX1P67809 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
YBX1P67809 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
YBX1P67809 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.02■□□□□ 0.32
YBX1P67809 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
YBX1P67809 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
YBX1P67809 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
YBX1P67809 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.02■□□□□ 0.32
YBX1P67809 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.02■□□□□ 0.32
YBX1P67809 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
YBX1P67809 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
YBX1P67809 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
YBX1P67809 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
YBX1P67809 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
YBX1P67809 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.02■□□□□ 0.32
YBX1P67809 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
YBX1P67809 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
YBX1P67809 POM121L3P-201ENST00000419331 1163 ntBASIC17.02■□□□□ 0.32
YBX1P67809 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.02■□□□□ 0.32
YBX1P67809 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.02■□□□□ 0.32
YBX1P67809 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
YBX1P67809 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
YBX1P67809 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
YBX1P67809 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
YBX1P67809 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
YBX1P67809 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
YBX1P67809 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
YBX1P67809 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
YBX1P67809 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
YBX1P67809 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.01■□□□□ 0.31
YBX1P67809 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
YBX1P67809 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.01■□□□□ 0.31
YBX1P67809 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
YBX1P67809 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
YBX1P67809 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
YBX1P67809 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
YBX1P67809 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
YBX1P67809 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.01■□□□□ 0.31
YBX1P67809 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
YBX1P67809 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.01■□□□□ 0.31
YBX1P67809 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.01■□□□□ 0.31
YBX1P67809 AC132008.2-207ENST00000454517 770 ntBASIC17.01■□□□□ 0.31
YBX1P67809 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.01■□□□□ 0.31
YBX1P67809 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.01■□□□□ 0.31
YBX1P67809 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.01■□□□□ 0.31
YBX1P67809 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.01■□□□□ 0.31
YBX1P67809 AC019129.2-201ENST00000609837 1235 ntBASIC17.01■□□□□ 0.31
YBX1P67809 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.01■□□□□ 0.31
YBX1P67809 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
YBX1P67809 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
YBX1P67809 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
YBX1P67809 AC106886.4-201ENST00000623557 2502 ntBASIC17.01■□□□□ 0.31
YBX1P67809 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
YBX1P67809 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
YBX1P67809 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.01■□□□□ 0.31
YBX1P67809 AGGF1P2-201ENST00000426656 2106 ntBASIC17■□□□□ 0.31
YBX1P67809 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
YBX1P67809 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
YBX1P67809 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
YBX1P67809 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17■□□□□ 0.31
YBX1P67809 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17■□□□□ 0.31
YBX1P67809 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17■□□□□ 0.31
YBX1P67809 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
YBX1P67809 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
YBX1P67809 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
YBX1P67809 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17■□□□□ 0.31
YBX1P67809 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
YBX1P67809 PC-208ENST00000529047 1607 ntTSL 3 BASIC17■□□□□ 0.31
YBX1P67809 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms