Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
AP1S1P61966 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP1S1P61966 AC016396.2-201ENST00000562575 1417 ntBASIC17.57■□□□□ 0.4
AP1S1P61966 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AP1S1P61966 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP1S1P61966 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
AP1S1P61966 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AP1S1P61966 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP1S1P61966 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP1S1P61966 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP1S1P61966 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP1S1P61966 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP1S1P61966 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.57■□□□□ 0.4
AP1S1P61966 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
AP1S1P61966 LAGE3P1-201ENST00000425356 484 ntBASIC17.57■□□□□ 0.4
AP1S1P61966 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP1S1P61966 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
AP1S1P61966 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.57■□□□□ 0.4
AP1S1P61966 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.57■□□□□ 0.4
AP1S1P61966 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.57■□□□□ 0.4
AP1S1P61966 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.57■□□□□ 0.4
AP1S1P61966 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP1S1P61966 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP1S1P61966 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
AP1S1P61966 AL135999.2-201ENST00000622438 1686 ntBASIC17.57■□□□□ 0.4
AP1S1P61966 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AP1S1P61966 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AP1S1P61966 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP1S1P61966 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP1S1P61966 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.57■□□□□ 0.4
AP1S1P61966 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AP1S1P61966 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
AP1S1P61966 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP1S1P61966 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP1S1P61966 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AP1S1P61966 NCF1C-201ENST00000438382 1427 ntBASIC17.56■□□□□ 0.4
AP1S1P61966 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.56■□□□□ 0.4
AP1S1P61966 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
AP1S1P61966 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.56■□□□□ 0.4
AP1S1P61966 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP1S1P61966 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AP1S1P61966 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AP1S1P61966 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.56■□□□□ 0.4
AP1S1P61966 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP1S1P61966 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP1S1P61966 ACTG1P4-201ENST00000425123 1122 ntBASIC17.56■□□□□ 0.4
AP1S1P61966 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.56■□□□□ 0.4
AP1S1P61966 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.56■□□□□ 0.4
AP1S1P61966 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.56■□□□□ 0.4
AP1S1P61966 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.56■□□□□ 0.4
AP1S1P61966 AL773604.1-201ENST00000617417 272 ntBASIC17.56■□□□□ 0.4
AP1S1P61966 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.56■□□□□ 0.4
AP1S1P61966 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AP1S1P61966 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP1S1P61966 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP1S1P61966 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP1S1P61966 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.56■□□□□ 0.4
AP1S1P61966 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
AP1S1P61966 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP1S1P61966 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP1S1P61966 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP1S1P61966 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP1S1P61966 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP1S1P61966 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
AP1S1P61966 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP1S1P61966 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP1S1P61966 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP1S1P61966 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP1S1P61966 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP1S1P61966 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
AP1S1P61966 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.55■□□□□ 0.4
AP1S1P61966 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP1S1P61966 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP1S1P61966 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP1S1P61966 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
AP1S1P61966 RPS2P28-201ENST00000314255 741 ntBASIC17.55■□□□□ 0.4
AP1S1P61966 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.55■□□□□ 0.4
AP1S1P61966 AC009078.2-202ENST00000463353 338 ntBASIC17.55■□□□□ 0.4
AP1S1P61966 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.55■□□□□ 0.4
AP1S1P61966 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.55■□□□□ 0.4
AP1S1P61966 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.55■□□□□ 0.4
AP1S1P61966 AC139887.3-201ENST00000568585 713 ntBASIC17.55■□□□□ 0.4
AP1S1P61966 SLC25A6P4-201ENST00000586535 553 ntBASIC17.55■□□□□ 0.4
AP1S1P61966 AC107918.4-202ENST00000641623 219 ntBASIC17.55■□□□□ 0.4
AP1S1P61966 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.55■□□□□ 0.4
AP1S1P61966 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
AP1S1P61966 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP1S1P61966 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP1S1P61966 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
AP1S1P61966 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP1S1P61966 AC097637.2-201ENST00000624096 1997 ntBASIC17.55■□□□□ 0.4
AP1S1P61966 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.55■□□□□ 0.4
AP1S1P61966 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP1S1P61966 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP1S1P61966 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP1S1P61966 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP1S1P61966 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP1S1P61966 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.54■□□□□ 0.4
AP1S1P61966 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.54■□□□□ 0.4
AP1S1P61966 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms