Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLRN1P58418 MINOS1P3-201ENST00000457048 203 ntBASIC15.64■□□□□ 0.09
CLRN1P58418 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLRN1P58418 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.64■□□□□ 0.09
CLRN1P58418 AC009533.2-201ENST00000543664 586 ntBASIC15.64■□□□□ 0.09
CLRN1P58418 AP002414.4-201ENST00000589764 1148 ntBASIC15.64■□□□□ 0.09
CLRN1P58418 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLRN1P58418 AL445228.2-201ENST00000605589 952 ntBASIC15.64■□□□□ 0.09
CLRN1P58418 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLRN1P58418 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLRN1P58418 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLRN1P58418 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLRN1P58418 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.64■□□□□ 0.09
CLRN1P58418 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLRN1P58418 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLRN1P58418 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLRN1P58418 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLRN1P58418 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.64■□□□□ 0.09
CLRN1P58418 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.64■□□□□ 0.09
CLRN1P58418 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLRN1P58418 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLRN1P58418 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLRN1P58418 AC106820.2-201ENST00000563775 3264 ntBASIC15.63■□□□□ 0.09
CLRN1P58418 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLRN1P58418 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.63■□□□□ 0.09
CLRN1P58418 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.63■□□□□ 0.09
CLRN1P58418 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CLRN1P58418 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CLRN1P58418 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLRN1P58418 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.63■□□□□ 0.09
CLRN1P58418 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLRN1P58418 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.63■□□□□ 0.09
CLRN1P58418 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLRN1P58418 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLRN1P58418 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLRN1P58418 MYCLP1-201ENST00000372451 1075 ntBASIC15.63■□□□□ 0.09
CLRN1P58418 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLRN1P58418 LINC00265-3P-201ENST00000447588 903 ntBASIC15.63■□□□□ 0.09
CLRN1P58418 TOB2P1-201ENST00000469761 992 ntBASIC15.63■□□□□ 0.09
CLRN1P58418 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.63■□□□□ 0.09
CLRN1P58418 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.63■□□□□ 0.09
CLRN1P58418 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.63■□□□□ 0.09
CLRN1P58418 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.63■□□□□ 0.09
CLRN1P58418 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CLRN1P58418 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CLRN1P58418 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.63■□□□□ 0.09
CLRN1P58418 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.63■□□□□ 0.09
CLRN1P58418 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CLRN1P58418 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLRN1P58418 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLRN1P58418 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CLRN1P58418 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLRN1P58418 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLRN1P58418 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLRN1P58418 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.63■□□□□ 0.09
CLRN1P58418 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.63■□□□□ 0.09
CLRN1P58418 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLRN1P58418 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.63■□□□□ 0.09
CLRN1P58418 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.63■□□□□ 0.09
CLRN1P58418 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLRN1P58418 AC233702.3-201ENST00000578656 1387 ntBASIC15.62■□□□□ 0.09
CLRN1P58418 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLRN1P58418 LYSMD4-203ENST00000378904 2122 ntBASIC15.62■□□□□ 0.09
CLRN1P58418 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLRN1P58418 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CLRN1P58418 SIRPAP1-201ENST00000448467 1770 ntBASIC15.62■□□□□ 0.09
CLRN1P58418 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLRN1P58418 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.62■□□□□ 0.09
CLRN1P58418 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CLRN1P58418 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLRN1P58418 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLRN1P58418 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CLRN1P58418 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLRN1P58418 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
CLRN1P58418 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLRN1P58418 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLRN1P58418 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLRN1P58418 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLRN1P58418 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLRN1P58418 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLRN1P58418 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.62■□□□□ 0.09
CLRN1P58418 DRAXINP1-201ENST00000437611 948 ntBASIC15.62■□□□□ 0.09
CLRN1P58418 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.62■□□□□ 0.09
CLRN1P58418 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.62■□□□□ 0.09
CLRN1P58418 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.62■□□□□ 0.09
CLRN1P58418 AC111152.3-201ENST00000569699 673 ntBASIC15.62■□□□□ 0.09
CLRN1P58418 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.62■□□□□ 0.09
CLRN1P58418 AC109462.3-201ENST00000573934 613 ntBASIC15.62■□□□□ 0.09
CLRN1P58418 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
CLRN1P58418 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLRN1P58418 AL139327.4-201ENST00000612362 153 ntBASIC15.62■□□□□ 0.09
CLRN1P58418 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.62■□□□□ 0.09
CLRN1P58418 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLRN1P58418 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLRN1P58418 AL645608.8-201ENST00000606034 2086 ntBASIC15.62■□□□□ 0.09
CLRN1P58418 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
CLRN1P58418 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLRN1P58418 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.62■□□□□ 0.09
CLRN1P58418 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CLRN1P58418 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms