Protein–RNA interactions for Protein: P55773

CCL23, C-C motif chemokine 23, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL23P55773 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCL23P55773 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCL23P55773 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCL23P55773 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCL23P55773 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCL23P55773 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCL23P55773 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.88■□□□□ 0.61
CCL23P55773 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCL23P55773 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCL23P55773 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCL23P55773 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CCL23P55773 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CCL23P55773 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCL23P55773 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCL23P55773 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCL23P55773 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCL23P55773 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCL23P55773 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCL23P55773 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.87■□□□□ 0.61
CCL23P55773 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCL23P55773 MIR943-201ENST00000401286 94 ntBASIC18.87■□□□□ 0.61
CCL23P55773 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCL23P55773 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.87■□□□□ 0.61
CCL23P55773 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCL23P55773 FAM58DP-201ENST00000428076 619 ntBASIC18.87■□□□□ 0.61
CCL23P55773 AC055876.3-201ENST00000431496 288 ntBASIC18.87■□□□□ 0.61
CCL23P55773 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCL23P55773 CNN2P2-201ENST00000443536 909 ntBASIC18.87■□□□□ 0.61
CCL23P55773 CNN2P3-201ENST00000450201 906 ntBASIC18.87■□□□□ 0.61
CCL23P55773 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.87■□□□□ 0.61
CCL23P55773 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCL23P55773 AC079140.1-201ENST00000508039 487 ntBASIC18.87■□□□□ 0.61
CCL23P55773 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCL23P55773 FAM86C2P-203ENST00000528684 1004 ntBASIC18.87■□□□□ 0.61
CCL23P55773 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.87■□□□□ 0.61
CCL23P55773 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.87■□□□□ 0.61
CCL23P55773 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.87■□□□□ 0.61
CCL23P55773 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.87■□□□□ 0.61
CCL23P55773 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.87■□□□□ 0.61
CCL23P55773 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.87■□□□□ 0.61
CCL23P55773 AC138649.4-201ENST00000612222 287 ntBASIC18.87■□□□□ 0.61
CCL23P55773 AL136317.3-201ENST00000618497 906 ntBASIC18.87■□□□□ 0.61
CCL23P55773 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.87■□□□□ 0.61
CCL23P55773 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCL23P55773 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.87■□□□□ 0.61
CCL23P55773 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CCL23P55773 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.86■□□□□ 0.61
CCL23P55773 AP000997.3-201ENST00000623333 2250 ntBASIC18.86■□□□□ 0.61
CCL23P55773 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCL23P55773 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.86■□□□□ 0.61
CCL23P55773 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.86■□□□□ 0.61
CCL23P55773 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCL23P55773 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CCL23P55773 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCL23P55773 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.86■□□□□ 0.61
CCL23P55773 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCL23P55773 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.86■□□□□ 0.61
CCL23P55773 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCL23P55773 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCL23P55773 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.86■□□□□ 0.61
CCL23P55773 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.86■□□□□ 0.61
CCL23P55773 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCL23P55773 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.86■□□□□ 0.61
CCL23P55773 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.86■□□□□ 0.61
CCL23P55773 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCL23P55773 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.86■□□□□ 0.61
CCL23P55773 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CCL23P55773 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.86■□□□□ 0.61
CCL23P55773 KRT18P32-201ENST00000424695 1287 ntBASIC18.86■□□□□ 0.61
CCL23P55773 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.86■□□□□ 0.61
CCL23P55773 BASP1P1-201ENST00000430708 665 ntBASIC18.86■□□□□ 0.61
CCL23P55773 AC087163.2-201ENST00000457299 853 ntBASIC18.86■□□□□ 0.61
CCL23P55773 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCL23P55773 AC069335.1-201ENST00000489972 472 ntBASIC18.86■□□□□ 0.61
CCL23P55773 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.86■□□□□ 0.61
CCL23P55773 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.86■□□□□ 0.61
CCL23P55773 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.86■□□□□ 0.61
CCL23P55773 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.86■□□□□ 0.61
CCL23P55773 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCL23P55773 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.86■□□□□ 0.61
CCL23P55773 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.86■□□□□ 0.61
CCL23P55773 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCL23P55773 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CCL23P55773 REXO1L9P-201ENST00000604264 2108 ntBASIC18.86■□□□□ 0.61
CCL23P55773 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CCL23P55773 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCL23P55773 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCL23P55773 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCL23P55773 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCL23P55773 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCL23P55773 AL135999.2-201ENST00000622438 1686 ntBASIC18.85■□□□□ 0.61
CCL23P55773 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.85■□□□□ 0.61
CCL23P55773 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCL23P55773 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCL23P55773 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.85■□□□□ 0.61
CCL23P55773 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCL23P55773 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCL23P55773 TUBB3P1-201ENST00000405796 1332 ntBASIC18.85■□□□□ 0.61
CCL23P55773 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.85■□□□□ 0.61
CCL23P55773 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms