Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
NCKAP1LP55160 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NCKAP1LP55160 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NCKAP1LP55160 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NCKAP1LP55160 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.09■□□□□ 0.65
NCKAP1LP55160 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NCKAP1LP55160 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
NCKAP1LP55160 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NCKAP1LP55160 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NCKAP1LP55160 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NCKAP1LP55160 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.08■□□□□ 0.65
NCKAP1LP55160 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
NCKAP1LP55160 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NCKAP1LP55160 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.08■□□□□ 0.64
NCKAP1LP55160 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.08■□□□□ 0.64
NCKAP1LP55160 LINC00982-205ENST00000420957 435 ntBASIC19.08■□□□□ 0.64
NCKAP1LP55160 RPS2P1-201ENST00000434010 821 ntBASIC19.08■□□□□ 0.64
NCKAP1LP55160 RNA5SP419-201ENST00000515908 135 ntBASIC19.08■□□□□ 0.64
NCKAP1LP55160 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.08■□□□□ 0.64
NCKAP1LP55160 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
NCKAP1LP55160 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NCKAP1LP55160 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NCKAP1LP55160 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.08■□□□□ 0.64
NCKAP1LP55160 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.08■□□□□ 0.64
NCKAP1LP55160 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NCKAP1LP55160 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
NCKAP1LP55160 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NCKAP1LP55160 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCKAP1LP55160 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
NCKAP1LP55160 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NCKAP1LP55160 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.07■□□□□ 0.64
NCKAP1LP55160 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NCKAP1LP55160 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NCKAP1LP55160 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCKAP1LP55160 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NCKAP1LP55160 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.07■□□□□ 0.64
NCKAP1LP55160 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCKAP1LP55160 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCKAP1LP55160 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCKAP1LP55160 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NCKAP1LP55160 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NCKAP1LP55160 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.07■□□□□ 0.64
NCKAP1LP55160 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCKAP1LP55160 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
NCKAP1LP55160 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCKAP1LP55160 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
NCKAP1LP55160 LAGE3P1-201ENST00000425356 484 ntBASIC19.07■□□□□ 0.64
NCKAP1LP55160 OR7E14P-202ENST00000530490 1290 ntBASIC19.07■□□□□ 0.64
NCKAP1LP55160 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.07■□□□□ 0.64
NCKAP1LP55160 AL353135.1-201ENST00000606729 504 ntBASIC19.07■□□□□ 0.64
NCKAP1LP55160 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.07■□□□□ 0.64
NCKAP1LP55160 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.07■□□□□ 0.64
NCKAP1LP55160 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NCKAP1LP55160 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCKAP1LP55160 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NCKAP1LP55160 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCKAP1LP55160 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.07■□□□□ 0.64
NCKAP1LP55160 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NCKAP1LP55160 AC139713.2-201ENST00000641328 2723 ntBASIC19.07■□□□□ 0.64
NCKAP1LP55160 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.07■□□□□ 0.64
NCKAP1LP55160 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.07■□□□□ 0.64
NCKAP1LP55160 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
NCKAP1LP55160 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.06■□□□□ 0.64
NCKAP1LP55160 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NCKAP1LP55160 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCKAP1LP55160 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCKAP1LP55160 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.06■□□□□ 0.64
NCKAP1LP55160 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NCKAP1LP55160 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCKAP1LP55160 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCKAP1LP55160 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
NCKAP1LP55160 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCKAP1LP55160 FDX1P1-201ENST00000449115 551 ntBASIC19.06■□□□□ 0.64
NCKAP1LP55160 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.06■□□□□ 0.64
NCKAP1LP55160 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.06■□□□□ 0.64
NCKAP1LP55160 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.06■□□□□ 0.64
NCKAP1LP55160 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.06■□□□□ 0.64
NCKAP1LP55160 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.06■□□□□ 0.64
NCKAP1LP55160 AC139887.3-201ENST00000568585 713 ntBASIC19.06■□□□□ 0.64
NCKAP1LP55160 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.06■□□□□ 0.64
NCKAP1LP55160 AL773604.1-201ENST00000617417 272 ntBASIC19.06■□□□□ 0.64
NCKAP1LP55160 AC004706.3-202ENST00000621574 984 ntBASIC19.06■□□□□ 0.64
NCKAP1LP55160 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
NCKAP1LP55160 HCG11-201ENST00000411553 5696 ntBASIC19.06■□□□□ 0.64
NCKAP1LP55160 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCKAP1LP55160 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCKAP1LP55160 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
NCKAP1LP55160 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NCKAP1LP55160 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.06■□□□□ 0.64
NCKAP1LP55160 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NCKAP1LP55160 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCKAP1LP55160 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
NCKAP1LP55160 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NCKAP1LP55160 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCKAP1LP55160 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCKAP1LP55160 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
NCKAP1LP55160 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
NCKAP1LP55160 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCKAP1LP55160 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.05■□□□□ 0.64
NCKAP1LP55160 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms