Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK2P53671 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.63■□□□□ 0.41
LIMK2P53671 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.62■□□□□ 0.41
LIMK2P53671 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK2P53671 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
LIMK2P53671 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK2P53671 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK2P53671 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK2P53671 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK2P53671 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.62■□□□□ 0.41
LIMK2P53671 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK2P53671 NKILA-202ENST00000614771 2598 ntBASIC17.62■□□□□ 0.41
LIMK2P53671 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK2P53671 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK2P53671 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK2P53671 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK2P53671 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK2P53671 EMBP1-201ENST00000458200 901 ntBASIC17.62■□□□□ 0.41
LIMK2P53671 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.62■□□□□ 0.41
LIMK2P53671 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.62■□□□□ 0.41
LIMK2P53671 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.62■□□□□ 0.41
LIMK2P53671 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.62■□□□□ 0.41
LIMK2P53671 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.62■□□□□ 0.41
LIMK2P53671 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LIMK2P53671 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK2P53671 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK2P53671 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK2P53671 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK2P53671 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LIMK2P53671 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.61■□□□□ 0.41
LIMK2P53671 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LIMK2P53671 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LIMK2P53671 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LIMK2P53671 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LIMK2P53671 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LIMK2P53671 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LIMK2P53671 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.61■□□□□ 0.41
LIMK2P53671 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LIMK2P53671 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LIMK2P53671 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LIMK2P53671 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LIMK2P53671 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.61■□□□□ 0.41
LIMK2P53671 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.61■□□□□ 0.41
LIMK2P53671 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LIMK2P53671 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LIMK2P53671 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LIMK2P53671 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LIMK2P53671 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LIMK2P53671 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LIMK2P53671 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LIMK2P53671 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
LIMK2P53671 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.61■□□□□ 0.41
LIMK2P53671 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.61■□□□□ 0.41
LIMK2P53671 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
LIMK2P53671 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.61■□□□□ 0.41
LIMK2P53671 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LIMK2P53671 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LIMK2P53671 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
LIMK2P53671 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
LIMK2P53671 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.61■□□□□ 0.41
LIMK2P53671 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.61■□□□□ 0.41
LIMK2P53671 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LIMK2P53671 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LIMK2P53671 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LIMK2P53671 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LIMK2P53671 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LIMK2P53671 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LIMK2P53671 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LIMK2P53671 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LIMK2P53671 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LIMK2P53671 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.6■□□□□ 0.41
LIMK2P53671 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LIMK2P53671 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LIMK2P53671 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
LIMK2P53671 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LIMK2P53671 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LIMK2P53671 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LIMK2P53671 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
LIMK2P53671 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LIMK2P53671 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LIMK2P53671 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LIMK2P53671 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LIMK2P53671 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LIMK2P53671 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LIMK2P53671 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LIMK2P53671 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LIMK2P53671 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.6■□□□□ 0.41
LIMK2P53671 MTCL1P1-201ENST00000446207 792 ntBASIC17.6■□□□□ 0.41
LIMK2P53671 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.6■□□□□ 0.41
LIMK2P53671 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LIMK2P53671 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LIMK2P53671 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.6■□□□□ 0.41
LIMK2P53671 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
LIMK2P53671 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.6■□□□□ 0.41
LIMK2P53671 KRT8P10-201ENST00000450021 1447 ntBASIC17.6■□□□□ 0.41
LIMK2P53671 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.6■□□□□ 0.41
LIMK2P53671 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LIMK2P53671 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LIMK2P53671 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LIMK2P53671 AC011676.5-201ENST00000624864 2660 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms