Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.72■□□□□ 0.75
USP11P51784 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.72■□□□□ 0.75
USP11P51784 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.72■□□□□ 0.75
USP11P51784 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.72■□□□□ 0.75
USP11P51784 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP11P51784 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP11P51784 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
USP11P51784 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
USP11P51784 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP11P51784 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP11P51784 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
USP11P51784 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP11P51784 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP11P51784 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.71■□□□□ 0.75
USP11P51784 LINC00982-205ENST00000420957 435 ntBASIC19.71■□□□□ 0.75
USP11P51784 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.71■□□□□ 0.75
USP11P51784 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.71■□□□□ 0.75
USP11P51784 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.71■□□□□ 0.75
USP11P51784 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.71■□□□□ 0.75
USP11P51784 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.71■□□□□ 0.75
USP11P51784 AC004706.3-202ENST00000621574 984 ntBASIC19.71■□□□□ 0.75
USP11P51784 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP11P51784 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP11P51784 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP11P51784 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP11P51784 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.71■□□□□ 0.75
USP11P51784 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP11P51784 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
USP11P51784 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP11P51784 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
USP11P51784 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
USP11P51784 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP11P51784 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP11P51784 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.7■□□□□ 0.74
USP11P51784 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP11P51784 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.7■□□□□ 0.74
USP11P51784 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP11P51784 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.7■□□□□ 0.74
USP11P51784 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
USP11P51784 AP001005.1-201ENST00000571755 1248 ntBASIC19.7■□□□□ 0.74
USP11P51784 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.7■□□□□ 0.74
USP11P51784 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.7■□□□□ 0.74
USP11P51784 AC008735.5-201ENST00000623544 497 ntBASIC19.7■□□□□ 0.74
USP11P51784 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP11P51784 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP11P51784 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
USP11P51784 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP11P51784 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP11P51784 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
USP11P51784 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP11P51784 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.7■□□□□ 0.74
USP11P51784 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.7■□□□□ 0.74
USP11P51784 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
USP11P51784 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP11P51784 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP11P51784 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP11P51784 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.69■□□□□ 0.74
USP11P51784 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP11P51784 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP11P51784 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP11P51784 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.69■□□□□ 0.74
USP11P51784 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
USP11P51784 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP11P51784 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.69■□□□□ 0.74
USP11P51784 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.69■□□□□ 0.74
USP11P51784 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.69■□□□□ 0.74
USP11P51784 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.69■□□□□ 0.74
USP11P51784 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.69■□□□□ 0.74
USP11P51784 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP11P51784 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.69■□□□□ 0.74
USP11P51784 AC006557.2-201ENST00000592985 1240 ntBASIC19.69■□□□□ 0.74
USP11P51784 AL353135.1-201ENST00000606729 504 ntBASIC19.69■□□□□ 0.74
USP11P51784 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP11P51784 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.69■□□□□ 0.74
USP11P51784 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
USP11P51784 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP11P51784 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP11P51784 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
USP11P51784 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.69■□□□□ 0.74
USP11P51784 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP11P51784 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP11P51784 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP11P51784 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP11P51784 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP11P51784 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
USP11P51784 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
USP11P51784 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP11P51784 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP11P51784 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP11P51784 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP11P51784 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
USP11P51784 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP11P51784 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
USP11P51784 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.68■□□□□ 0.74
USP11P51784 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP11P51784 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP11P51784 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.68■□□□□ 0.74
USP11P51784 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.68■□□□□ 0.74
USP11P51784 KRT18P27-201ENST00000427733 1299 ntBASIC19.68■□□□□ 0.74
USP11P51784 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms