Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CBX5P45973 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CBX5P45973 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CBX5P45973 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CBX5P45973 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.1■□□□□ 0.01
CBX5P45973 AL122018.1-201ENST00000446607 2310 ntBASIC15.1■□□□□ 0.01
CBX5P45973 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CBX5P45973 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CBX5P45973 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.1■□□□□ 0.01
CBX5P45973 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CBX5P45973 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.1■□□□□ 0.01
CBX5P45973 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CBX5P45973 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CBX5P45973 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CBX5P45973 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CBX5P45973 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.09■□□□□ 0.01
CBX5P45973 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
CBX5P45973 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CBX5P45973 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.09■□□□□ 0.01
CBX5P45973 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.09■□□□□ 0.01
CBX5P45973 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.09■□□□□ 0.01
CBX5P45973 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CBX5P45973 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.09■□□□□ 0.01
CBX5P45973 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.09■□□□□ 0.01
CBX5P45973 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.09■□□□□ 0.01
CBX5P45973 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.09■□□□□ 0.01
CBX5P45973 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.09■□□□□ 0.01
CBX5P45973 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.09■□□□□ 0.01
CBX5P45973 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CBX5P45973 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.09■□□□□ 0.01
CBX5P45973 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.09■□□□□ 0.01
CBX5P45973 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC15.09■□□□□ 0.01
CBX5P45973 CD177P1-201ENST00000606252 935 ntBASIC15.09■□□□□ 0.01
CBX5P45973 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CBX5P45973 CR769767.2-201ENST00000622735 460 ntBASIC15.09■□□□□ 0.01
CBX5P45973 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.09■□□□□ 0.01
CBX5P45973 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CBX5P45973 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC15.09■□□□□ 0.01
CBX5P45973 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CBX5P45973 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.09■□□□□ 0.01
CBX5P45973 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CBX5P45973 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CBX5P45973 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CBX5P45973 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.09■□□□□ 0.01
CBX5P45973 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CBX5P45973 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CBX5P45973 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.09■□□□□ 0.01
CBX5P45973 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CBX5P45973 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CBX5P45973 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.09■□□□□ 0.01
CBX5P45973 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CBX5P45973 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.09■□□□□ 0.01
CBX5P45973 AC016396.2-201ENST00000562575 1417 ntBASIC15.09■□□□□ 0.01
CBX5P45973 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CBX5P45973 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CBX5P45973 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
CBX5P45973 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
CBX5P45973 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.08■□□□□ 0.01
CBX5P45973 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
CBX5P45973 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
CBX5P45973 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0.01
CBX5P45973 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
CBX5P45973 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
CBX5P45973 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CBX5P45973 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CBX5P45973 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CBX5P45973 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.08■□□□□ 0.01
CBX5P45973 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.08■□□□□ 0
CBX5P45973 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.08■□□□□ 0
CBX5P45973 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
CBX5P45973 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CBX5P45973 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CBX5P45973 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.08■□□□□ 0
CBX5P45973 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
CBX5P45973 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CBX5P45973 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CBX5P45973 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CBX5P45973 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CBX5P45973 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CBX5P45973 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CBX5P45973 DDX43P3-201ENST00000441064 443 ntBASIC15.08■□□□□ 0
CBX5P45973 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CBX5P45973 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CBX5P45973 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CBX5P45973 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
CBX5P45973 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.08■□□□□ 0
CBX5P45973 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CBX5P45973 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC15.08■□□□□ 0
CBX5P45973 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.08■□□□□ 0
CBX5P45973 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.08■□□□□ 0
CBX5P45973 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CBX5P45973 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CBX5P45973 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.08■□□□□ 0
CBX5P45973 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
CBX5P45973 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CBX5P45973 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CBX5P45973 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.08■□□□□ 0
CBX5P45973 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CBX5P45973 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CBX5P45973 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms