Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MMP13P45452 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MMP13P45452 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.18■□□□□ 0.5
MMP13P45452 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MMP13P45452 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MMP13P45452 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
MMP13P45452 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MMP13P45452 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
MMP13P45452 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MMP13P45452 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MMP13P45452 AL845331.1-201ENST00000424978 1190 ntBASIC18.18■□□□□ 0.5
MMP13P45452 AP002383.4-201ENST00000442518 975 ntBASIC18.18■□□□□ 0.5
MMP13P45452 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.18■□□□□ 0.5
MMP13P45452 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
MMP13P45452 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
MMP13P45452 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.18■□□□□ 0.5
MMP13P45452 AP002414.4-201ENST00000589764 1148 ntBASIC18.18■□□□□ 0.5
MMP13P45452 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.18■□□□□ 0.5
MMP13P45452 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
MMP13P45452 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
MMP13P45452 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
MMP13P45452 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MMP13P45452 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
MMP13P45452 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.18■□□□□ 0.5
MMP13P45452 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MMP13P45452 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.18■□□□□ 0.5
MMP13P45452 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MMP13P45452 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MMP13P45452 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
MMP13P45452 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.17■□□□□ 0.5
MMP13P45452 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
MMP13P45452 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
MMP13P45452 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
MMP13P45452 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MMP13P45452 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
MMP13P45452 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MMP13P45452 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
MMP13P45452 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
MMP13P45452 UPK3BP1-201ENST00000428678 509 ntBASIC18.17■□□□□ 0.5
MMP13P45452 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.17■□□□□ 0.5
MMP13P45452 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.17■□□□□ 0.5
MMP13P45452 VENTXP7-201ENST00000475503 772 ntBASIC18.17■□□□□ 0.5
MMP13P45452 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
MMP13P45452 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MMP13P45452 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.17■□□□□ 0.5
MMP13P45452 AL353801.3-201ENST00000609898 542 ntBASIC18.17■□□□□ 0.5
MMP13P45452 AC093458.2-201ENST00000623150 629 ntBASIC18.17■□□□□ 0.5
MMP13P45452 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
MMP13P45452 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.17■□□□□ 0.5
MMP13P45452 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MMP13P45452 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
MMP13P45452 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MMP13P45452 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MMP13P45452 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
MMP13P45452 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.17■□□□□ 0.5
MMP13P45452 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
MMP13P45452 PCDH8P1-201ENST00000428983 2773 ntBASIC18.17■□□□□ 0.5
MMP13P45452 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
MMP13P45452 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
MMP13P45452 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
MMP13P45452 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MMP13P45452 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MMP13P45452 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MMP13P45452 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.17■□□□□ 0.5
MMP13P45452 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
MMP13P45452 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
MMP13P45452 AC009949.1-201ENST00000623048 1830 ntBASIC18.16■□□□□ 0.5
MMP13P45452 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MMP13P45452 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
MMP13P45452 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MMP13P45452 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
MMP13P45452 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
MMP13P45452 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.16■□□□□ 0.5
MMP13P45452 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
MMP13P45452 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MMP13P45452 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MMP13P45452 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MMP13P45452 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.16■□□□□ 0.5
MMP13P45452 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MMP13P45452 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
MMP13P45452 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.16■□□□□ 0.5
MMP13P45452 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.16■□□□□ 0.5
MMP13P45452 DRAXINP1-201ENST00000437611 948 ntBASIC18.16■□□□□ 0.5
MMP13P45452 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.16■□□□□ 0.5
MMP13P45452 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.16■□□□□ 0.5
MMP13P45452 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
MMP13P45452 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MMP13P45452 NPAP1P7-201ENST00000613027 823 ntBASIC18.16■□□□□ 0.5
MMP13P45452 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MMP13P45452 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
MMP13P45452 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.16■□□□□ 0.5
MMP13P45452 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.16■□□□□ 0.5
MMP13P45452 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.16■□□□□ 0.5
MMP13P45452 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.16■□□□□ 0.5
MMP13P45452 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MMP13P45452 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
MMP13P45452 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MMP13P45452 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MMP13P45452 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MMP13P45452 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms