Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 FAM197Y1-201ENST00000421178 764 ntBASIC14.34□□□□□ -0.11
NKX2-1P43699 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.34□□□□□ -0.11
NKX2-1P43699 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-1P43699 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.34□□□□□ -0.11
NKX2-1P43699 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.34□□□□□ -0.11
NKX2-1P43699 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-1P43699 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.34□□□□□ -0.11
NKX2-1P43699 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.34□□□□□ -0.11
NKX2-1P43699 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.34□□□□□ -0.11
NKX2-1P43699 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.34□□□□□ -0.11
NKX2-1P43699 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NKX2-1P43699 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC14.34□□□□□ -0.11
NKX2-1P43699 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
NKX2-1P43699 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-1P43699 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-1P43699 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-1P43699 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-1P43699 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.34□□□□□ -0.11
NKX2-1P43699 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-1P43699 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.34□□□□□ -0.11
NKX2-1P43699 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.34□□□□□ -0.11
NKX2-1P43699 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NKX2-1P43699 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-1P43699 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC14.34□□□□□ -0.11
NKX2-1P43699 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.34□□□□□ -0.11
NKX2-1P43699 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-1P43699 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.34□□□□□ -0.11
NKX2-1P43699 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-1P43699 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NKX2-1P43699 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-1P43699 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-1P43699 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-1P43699 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-1P43699 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
NKX2-1P43699 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.33□□□□□ -0.11
NKX2-1P43699 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.33□□□□□ -0.11
NKX2-1P43699 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NKX2-1P43699 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
NKX2-1P43699 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NKX2-1P43699 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.33□□□□□ -0.11
NKX2-1P43699 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NKX2-1P43699 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.33□□□□□ -0.11
NKX2-1P43699 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.11
NKX2-1P43699 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.33□□□□□ -0.11
NKX2-1P43699 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.33□□□□□ -0.12
NKX2-1P43699 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NKX2-1P43699 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-1P43699 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-1P43699 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-1P43699 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-1P43699 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
NKX2-1P43699 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-1P43699 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-1P43699 CRYGFP-201ENST00000418459 633 ntBASIC14.33□□□□□ -0.12
NKX2-1P43699 AL355355.2-201ENST00000442321 338 ntBASIC14.33□□□□□ -0.12
NKX2-1P43699 TSPY20P-201ENST00000450910 630 ntBASIC14.33□□□□□ -0.12
NKX2-1P43699 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.33□□□□□ -0.12
NKX2-1P43699 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.33□□□□□ -0.12
NKX2-1P43699 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.33□□□□□ -0.12
NKX2-1P43699 FAM197Y4-202ENST00000622692 608 ntBASIC14.33□□□□□ -0.12
NKX2-1P43699 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NKX2-1P43699 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-1P43699 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-1P43699 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.33□□□□□ -0.12
NKX2-1P43699 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.33□□□□□ -0.12
NKX2-1P43699 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.33□□□□□ -0.12
NKX2-1P43699 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-1P43699 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.33□□□□□ -0.12
NKX2-1P43699 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-1P43699 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
NKX2-1P43699 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
NKX2-1P43699 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.33□□□□□ -0.12
NKX2-1P43699 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-1P43699 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-1P43699 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.33□□□□□ -0.12
NKX2-1P43699 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-1P43699 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-1P43699 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-1P43699 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.33□□□□□ -0.12
NKX2-1P43699 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-1P43699 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-1P43699 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.33□□□□□ -0.12
NKX2-1P43699 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NKX2-1P43699 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-1P43699 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-1P43699 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-1P43699 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-1P43699 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-1P43699 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-1P43699 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
NKX2-1P43699 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
NKX2-1P43699 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
NKX2-1P43699 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.32□□□□□ -0.12
NKX2-1P43699 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-1P43699 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-1P43699 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
NKX2-1P43699 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC14.32□□□□□ -0.12
NKX2-1P43699 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-1P43699 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-1P43699 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms