Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 REXO1L3P-201ENST00000622202 1288 ntBASIC22.01■■□□□ 1.11
COL15A1P39059 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL15A1P39059 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
COL15A1P39059 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL15A1P39059 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL15A1P39059 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL15A1P39059 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC22.01■■□□□ 1.11
COL15A1P39059 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL15A1P39059 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL15A1P39059 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL15A1P39059 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC22.01■■□□□ 1.11
COL15A1P39059 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL15A1P39059 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL15A1P39059 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC22■■□□□ 1.11
COL15A1P39059 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
COL15A1P39059 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL15A1P39059 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL15A1P39059 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC22■■□□□ 1.11
COL15A1P39059 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL15A1P39059 BCRP1-201ENST00000444246 691 ntBASIC22■■□□□ 1.11
COL15A1P39059 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
COL15A1P39059 AC109322.1-201ENST00000524499 1264 ntBASIC22■■□□□ 1.11
COL15A1P39059 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL15A1P39059 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
COL15A1P39059 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC22■■□□□ 1.11
COL15A1P39059 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL15A1P39059 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
COL15A1P39059 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL15A1P39059 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL15A1P39059 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
COL15A1P39059 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL15A1P39059 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
COL15A1P39059 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL15A1P39059 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC21.99■■□□□ 1.11
COL15A1P39059 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC21.99■■□□□ 1.11
COL15A1P39059 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC21.99■■□□□ 1.11
COL15A1P39059 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.99■■□□□ 1.11
COL15A1P39059 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL15A1P39059 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL15A1P39059 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL15A1P39059 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL15A1P39059 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.99■■□□□ 1.11
COL15A1P39059 REXO1L11P-201ENST00000620964 1927 ntBASIC21.99■■□□□ 1.11
COL15A1P39059 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC21.99■■□□□ 1.11
COL15A1P39059 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL15A1P39059 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.99■■□□□ 1.11
COL15A1P39059 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.99■■□□□ 1.11
COL15A1P39059 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL15A1P39059 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL15A1P39059 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL15A1P39059 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL15A1P39059 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.99■■□□□ 1.11
COL15A1P39059 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL15A1P39059 LHX6-205ENST00000464484 666 ntTSL 2 BASIC21.99■■□□□ 1.11
COL15A1P39059 HLA-J-203ENST00000494367 1087 ntBASIC21.99■■□□□ 1.11
COL15A1P39059 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL15A1P39059 IGHV3OR16-6-201ENST00000568775 360 ntBASIC21.99■■□□□ 1.11
COL15A1P39059 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC21.99■■□□□ 1.11
COL15A1P39059 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL15A1P39059 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
COL15A1P39059 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL15A1P39059 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
COL15A1P39059 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL15A1P39059 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL15A1P39059 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
COL15A1P39059 AL121761.2-201ENST00000598007 1648 ntBASIC21.98■■□□□ 1.11
COL15A1P39059 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL15A1P39059 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL15A1P39059 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL15A1P39059 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL15A1P39059 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL15A1P39059 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.98■■□□□ 1.11
COL15A1P39059 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL15A1P39059 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC21.98■■□□□ 1.11
COL15A1P39059 FAM185BP-201ENST00000443595 716 ntBASIC21.98■■□□□ 1.11
COL15A1P39059 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC21.98■■□□□ 1.11
COL15A1P39059 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL15A1P39059 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC21.98■■□□□ 1.11
COL15A1P39059 AC004449.1-201ENST00000564240 433 ntBASIC21.98■■□□□ 1.11
COL15A1P39059 AL096865.1-201ENST00000606796 927 ntBASIC21.98■■□□□ 1.11
COL15A1P39059 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL15A1P39059 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.98■■□□□ 1.11
COL15A1P39059 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
COL15A1P39059 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
COL15A1P39059 CYP51A1P2-201ENST00000419457 1499 ntBASIC21.97■■□□□ 1.11
COL15A1P39059 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC21.97■■□□□ 1.11
COL15A1P39059 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL15A1P39059 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
COL15A1P39059 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL15A1P39059 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
COL15A1P39059 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.97■■□□□ 1.11
COL15A1P39059 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL15A1P39059 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.97■■□□□ 1.11
COL15A1P39059 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL15A1P39059 NABP1-203ENST00000409510 843 ntTSL 5 BASIC21.97■■□□□ 1.11
COL15A1P39059 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC21.97■■□□□ 1.11
COL15A1P39059 PAWRP1-201ENST00000451083 565 ntBASIC21.97■■□□□ 1.11
COL15A1P39059 AL513480.1-201ENST00000451731 511 ntBASIC21.97■■□□□ 1.11
COL15A1P39059 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC21.97■■□□□ 1.11
COL15A1P39059 CFL1-212ENST00000531413 636 ntTSL 3 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms