Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT20P35900 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT20P35900 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT20P35900 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT20P35900 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT20P35900 KRT18P65-201ENST00000439811 1286 ntBASIC16.66■□□□□ 0.26
KRT20P35900 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.66■□□□□ 0.26
KRT20P35900 BX276092.5-203ENST00000456199 560 ntBASIC16.66■□□□□ 0.26
KRT20P35900 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT20P35900 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT20P35900 GUSBP12-201ENST00000513727 720 ntBASIC16.66■□□□□ 0.26
KRT20P35900 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT20P35900 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT20P35900 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.66■□□□□ 0.26
KRT20P35900 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
KRT20P35900 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
KRT20P35900 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.66■□□□□ 0.26
KRT20P35900 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.66■□□□□ 0.26
KRT20P35900 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.66■□□□□ 0.26
KRT20P35900 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
KRT20P35900 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT20P35900 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT20P35900 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT20P35900 PKD1P5-201ENST00000532415 10291 ntBASIC16.66■□□□□ 0.26
KRT20P35900 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT20P35900 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
KRT20P35900 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT20P35900 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT20P35900 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT20P35900 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT20P35900 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT20P35900 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT20P35900 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
KRT20P35900 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT20P35900 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT20P35900 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.65■□□□□ 0.26
KRT20P35900 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT20P35900 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT20P35900 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT20P35900 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT20P35900 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT20P35900 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT20P35900 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
KRT20P35900 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.65■□□□□ 0.26
KRT20P35900 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT20P35900 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.65■□□□□ 0.26
KRT20P35900 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.65■□□□□ 0.26
KRT20P35900 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.65■□□□□ 0.26
KRT20P35900 RNF126P1-202ENST00000569893 925 ntBASIC16.65■□□□□ 0.26
KRT20P35900 AL121672.3-201ENST00000608644 468 ntBASIC16.65■□□□□ 0.26
KRT20P35900 AC009154.2-201ENST00000621177 724 ntBASIC16.65■□□□□ 0.26
KRT20P35900 AP000550.4-202ENST00000639755 178 ntBASIC16.65■□□□□ 0.26
KRT20P35900 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT20P35900 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT20P35900 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.65■□□□□ 0.26
KRT20P35900 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT20P35900 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.65■□□□□ 0.26
KRT20P35900 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KRT20P35900 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT20P35900 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT20P35900 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KRT20P35900 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT20P35900 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
KRT20P35900 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.65■□□□□ 0.26
KRT20P35900 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT20P35900 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.65■□□□□ 0.26
KRT20P35900 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.64■□□□□ 0.25
KRT20P35900 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT20P35900 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT20P35900 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT20P35900 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.64■□□□□ 0.25
KRT20P35900 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT20P35900 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT20P35900 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.64■□□□□ 0.25
KRT20P35900 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT20P35900 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.64■□□□□ 0.25
KRT20P35900 LINC00167-201ENST00000530583 1419 ntBASIC16.64■□□□□ 0.25
KRT20P35900 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
KRT20P35900 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT20P35900 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.64■□□□□ 0.25
KRT20P35900 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT20P35900 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
KRT20P35900 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
KRT20P35900 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.64■□□□□ 0.25
KRT20P35900 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT20P35900 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT20P35900 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT20P35900 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
KRT20P35900 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.64■□□□□ 0.25
KRT20P35900 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KRT20P35900 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT20P35900 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT20P35900 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT20P35900 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT20P35900 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KRT20P35900 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT20P35900 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
KRT20P35900 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.64■□□□□ 0.25
KRT20P35900 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT20P35900 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms