Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A4P31645 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SLC6A4P31645 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A4P31645 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC6A4P31645 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
SLC6A4P31645 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC6A4P31645 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC6A4P31645 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A4P31645 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A4P31645 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SLC6A4P31645 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.9■□□□□ 0.46
SLC6A4P31645 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SLC6A4P31645 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.9■□□□□ 0.46
SLC6A4P31645 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.9■□□□□ 0.46
SLC6A4P31645 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A4P31645 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.9■□□□□ 0.46
SLC6A4P31645 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.9■□□□□ 0.46
SLC6A4P31645 AC106730.1-201ENST00000566722 1090 ntBASIC17.9■□□□□ 0.46
SLC6A4P31645 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
SLC6A4P31645 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC6A4P31645 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A4P31645 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A4P31645 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
SLC6A4P31645 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A4P31645 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SLC6A4P31645 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A4P31645 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A4P31645 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A4P31645 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.9■□□□□ 0.46
SLC6A4P31645 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC6A4P31645 AC104109.2-201ENST00000602919 1418 ntBASIC17.89■□□□□ 0.46
SLC6A4P31645 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.89■□□□□ 0.46
SLC6A4P31645 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SLC6A4P31645 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC6A4P31645 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC6A4P31645 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC6A4P31645 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC6A4P31645 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC6A4P31645 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SLC6A4P31645 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC6A4P31645 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC6A4P31645 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC6A4P31645 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC6A4P31645 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC6A4P31645 AC136632.2-201ENST00000512891 861 ntBASIC17.89■□□□□ 0.45
SLC6A4P31645 UNC93B6-202ENST00000528242 690 ntBASIC17.89■□□□□ 0.45
SLC6A4P31645 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC6A4P31645 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC6A4P31645 AC145285.3-201ENST00000564603 959 ntBASIC17.89■□□□□ 0.45
SLC6A4P31645 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC6A4P31645 AL353135.1-201ENST00000606729 504 ntBASIC17.89■□□□□ 0.45
SLC6A4P31645 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SLC6A4P31645 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC6A4P31645 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
SLC6A4P31645 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC6A4P31645 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC6A4P31645 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC6A4P31645 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC6A4P31645 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC6A4P31645 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC6A4P31645 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC6A4P31645 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SLC6A4P31645 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A4P31645 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SLC6A4P31645 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SLC6A4P31645 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC6A4P31645 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SLC6A4P31645 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A4P31645 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A4P31645 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC6A4P31645 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A4P31645 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A4P31645 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A4P31645 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A4P31645 MIR574-201ENST00000385209 96 ntBASIC17.88■□□□□ 0.45
SLC6A4P31645 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SLC6A4P31645 AC034105.1-201ENST00000563488 319 ntBASIC17.88■□□□□ 0.45
SLC6A4P31645 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SLC6A4P31645 MIR1199-201ENST00000621445 119 ntBASIC17.88■□□□□ 0.45
SLC6A4P31645 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A4P31645 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A4P31645 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A4P31645 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SLC6A4P31645 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A4P31645 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A4P31645 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A4P31645 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A4P31645 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A4P31645 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
SLC6A4P31645 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SLC6A4P31645 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC6A4P31645 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC6A4P31645 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC6A4P31645 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SLC6A4P31645 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC6A4P31645 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC6A4P31645 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC6A4P31645 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SLC6A4P31645 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.87■□□□□ 0.45
SLC6A4P31645 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms