Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HOXA11P31270 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.79■□□□□ 0.6
HOXA11P31270 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.79■□□□□ 0.6
HOXA11P31270 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXA11P31270 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.79■□□□□ 0.6
HOXA11P31270 AC096734.2-201ENST00000562054 433 ntBASIC18.79■□□□□ 0.6
HOXA11P31270 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXA11P31270 MTDHP5-201ENST00000598980 586 ntBASIC18.79■□□□□ 0.6
HOXA11P31270 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.79■□□□□ 0.6
HOXA11P31270 AC010507.1-201ENST00000633895 436 ntBASIC18.79■□□□□ 0.6
HOXA11P31270 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOXA11P31270 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HOXA11P31270 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXA11P31270 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXA11P31270 AC002310.6-201ENST00000624451 1377 ntBASIC18.79■□□□□ 0.6
HOXA11P31270 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
HOXA11P31270 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.79■□□□□ 0.6
HOXA11P31270 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOXA11P31270 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXA11P31270 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA11P31270 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA11P31270 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA11P31270 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA11P31270 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.78■□□□□ 0.6
HOXA11P31270 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA11P31270 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA11P31270 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA11P31270 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA11P31270 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA11P31270 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXA11P31270 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
HOXA11P31270 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA11P31270 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
HOXA11P31270 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.78■□□□□ 0.6
HOXA11P31270 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.78■□□□□ 0.6
HOXA11P31270 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.78■□□□□ 0.6
HOXA11P31270 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.78■□□□□ 0.6
HOXA11P31270 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXA11P31270 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXA11P31270 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.78■□□□□ 0.6
HOXA11P31270 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.78■□□□□ 0.6
HOXA11P31270 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA11P31270 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
HOXA11P31270 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA11P31270 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
HOXA11P31270 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA11P31270 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA11P31270 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.78■□□□□ 0.6
HOXA11P31270 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HOXA11P31270 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.77■□□□□ 0.6
HOXA11P31270 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.77■□□□□ 0.6
HOXA11P31270 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.77■□□□□ 0.6
HOXA11P31270 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HOXA11P31270 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.77■□□□□ 0.6
HOXA11P31270 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.77■□□□□ 0.6
HOXA11P31270 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
HOXA11P31270 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXA11P31270 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXA11P31270 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HOXA11P31270 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXA11P31270 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
HOXA11P31270 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
HOXA11P31270 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.77■□□□□ 0.6
HOXA11P31270 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.77■□□□□ 0.6
HOXA11P31270 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.77■□□□□ 0.6
HOXA11P31270 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.77■□□□□ 0.6
HOXA11P31270 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.77■□□□□ 0.6
HOXA11P31270 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.77■□□□□ 0.6
HOXA11P31270 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.77■□□□□ 0.6
HOXA11P31270 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXA11P31270 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXA11P31270 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HOXA11P31270 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXA11P31270 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.77■□□□□ 0.59
HOXA11P31270 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
HOXA11P31270 AC007613.1-201ENST00000572811 2597 ntBASIC18.77■□□□□ 0.59
HOXA11P31270 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
HOXA11P31270 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.76■□□□□ 0.59
HOXA11P31270 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXA11P31270 AC134043.2-201ENST00000624206 2238 ntBASIC18.76■□□□□ 0.59
HOXA11P31270 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HOXA11P31270 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
HOXA11P31270 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXA11P31270 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.76■□□□□ 0.59
HOXA11P31270 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.76■□□□□ 0.59
HOXA11P31270 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.76■□□□□ 0.59
HOXA11P31270 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
HOXA11P31270 MIR3687-2-201ENST00000577708 61 ntBASIC18.76■□□□□ 0.59
HOXA11P31270 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.76■□□□□ 0.59
HOXA11P31270 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.76■□□□□ 0.59
HOXA11P31270 MIR3687-1-201ENST00000614492 61 ntBASIC18.76■□□□□ 0.59
HOXA11P31270 AC004877.2-201ENST00000623941 599 ntBASIC18.76■□□□□ 0.59
HOXA11P31270 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXA11P31270 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.76■□□□□ 0.59
HOXA11P31270 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HOXA11P31270 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
HOXA11P31270 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.76■□□□□ 0.59
HOXA11P31270 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXA11P31270 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.76■□□□□ 0.59
HOXA11P31270 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms