Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CDH3P22223 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH3P22223 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.15■□□□□ 0.34
CDH3P22223 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH3P22223 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH3P22223 AKR1C7P-201ENST00000305623 895 ntBASIC17.15■□□□□ 0.34
CDH3P22223 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH3P22223 AC132008.2-207ENST00000454517 770 ntBASIC17.15■□□□□ 0.34
CDH3P22223 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.15■□□□□ 0.34
CDH3P22223 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH3P22223 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
CDH3P22223 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.15■□□□□ 0.34
CDH3P22223 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.15■□□□□ 0.34
CDH3P22223 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.15■□□□□ 0.34
CDH3P22223 AC011467.2-201ENST00000598425 242 ntBASIC17.15■□□□□ 0.34
CDH3P22223 AL031008.1-201ENST00000619963 541 ntBASIC17.15■□□□□ 0.34
CDH3P22223 REXO1L6P-202ENST00000619970 1078 ntBASIC17.15■□□□□ 0.34
CDH3P22223 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CDH3P22223 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.15■□□□□ 0.34
CDH3P22223 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH3P22223 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH3P22223 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
CDH3P22223 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.15■□□□□ 0.34
CDH3P22223 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH3P22223 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
CDH3P22223 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH3P22223 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH3P22223 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.15■□□□□ 0.34
CDH3P22223 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH3P22223 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH3P22223 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
CDH3P22223 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH3P22223 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH3P22223 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CDH3P22223 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.34
CDH3P22223 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH3P22223 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.14■□□□□ 0.33
CDH3P22223 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH3P22223 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH3P22223 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH3P22223 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH3P22223 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH3P22223 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH3P22223 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.14■□□□□ 0.33
CDH3P22223 AC079781.3-201ENST00000449110 356 ntBASIC17.14■□□□□ 0.33
CDH3P22223 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.14■□□□□ 0.33
CDH3P22223 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.14■□□□□ 0.33
CDH3P22223 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.14■□□□□ 0.33
CDH3P22223 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH3P22223 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.14■□□□□ 0.33
CDH3P22223 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH3P22223 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH3P22223 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH3P22223 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH3P22223 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH3P22223 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH3P22223 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH3P22223 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CDH3P22223 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.14■□□□□ 0.33
CDH3P22223 KRT8P47-201ENST00000604727 1398 ntBASIC17.14■□□□□ 0.33
CDH3P22223 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH3P22223 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH3P22223 INTS4P1-201ENST00000438455 1935 ntBASIC17.13■□□□□ 0.33
CDH3P22223 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH3P22223 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH3P22223 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH3P22223 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH3P22223 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH3P22223 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH3P22223 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH3P22223 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH3P22223 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CDH3P22223 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH3P22223 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH3P22223 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CDH3P22223 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH3P22223 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH3P22223 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH3P22223 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH3P22223 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
CDH3P22223 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH3P22223 AC008764.6-201ENST00000595909 2069 ntBASIC17.13■□□□□ 0.33
CDH3P22223 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH3P22223 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH3P22223 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH3P22223 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CDH3P22223 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH3P22223 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH3P22223 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
CDH3P22223 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH3P22223 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH3P22223 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH3P22223 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH3P22223 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH3P22223 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH3P22223 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.13■□□□□ 0.33
CDH3P22223 AL121912.1-201ENST00000603683 238 ntBASIC17.13■□□□□ 0.33
CDH3P22223 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH3P22223 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH3P22223 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms