Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.65■□□□□ 0.42
HLA-DPA1P20036 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 AC139713.2-201ENST00000641328 2723 ntBASIC17.65■□□□□ 0.42
HLA-DPA1P20036 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.65■□□□□ 0.42
HLA-DPA1P20036 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
HLA-DPA1P20036 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 NUS1P2-201ENST00000417358 873 ntBASIC17.64■□□□□ 0.41
HLA-DPA1P20036 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 NUS1P1-201ENST00000446295 882 ntBASIC17.64■□□□□ 0.41
HLA-DPA1P20036 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 KRT16P4-201ENST00000453883 522 ntBASIC17.64■□□□□ 0.41
HLA-DPA1P20036 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 MIR3652-201ENST00000579335 131 ntBASIC17.64■□□□□ 0.41
HLA-DPA1P20036 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPA1P20036 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.63■□□□□ 0.41
HLA-DPA1P20036 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HLA-DPA1P20036 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.63■□□□□ 0.41
HLA-DPA1P20036 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPA1P20036 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPA1P20036 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPA1P20036 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPA1P20036 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPA1P20036 AC003669.1-201ENST00000334569 611 ntBASIC17.63■□□□□ 0.41
HLA-DPA1P20036 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPA1P20036 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
HLA-DPA1P20036 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPA1P20036 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.63■□□□□ 0.41
HLA-DPA1P20036 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-DPA1P20036 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.63■□□□□ 0.41
HLA-DPA1P20036 MIR5100-201ENST00000579544 119 ntBASIC17.63■□□□□ 0.41
HLA-DPA1P20036 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.63■□□□□ 0.41
HLA-DPA1P20036 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.63■□□□□ 0.41
HLA-DPA1P20036 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.63■□□□□ 0.41
HLA-DPA1P20036 AC138894.3-201ENST00000603787 634 ntBASIC17.63■□□□□ 0.41
HLA-DPA1P20036 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPA1P20036 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPA1P20036 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPA1P20036 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPA1P20036 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPA1P20036 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPA1P20036 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPA1P20036 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-DPA1P20036 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HLA-DPA1P20036 AC046185.3-201ENST00000623228 1824 ntBASIC17.63■□□□□ 0.41
HLA-DPA1P20036 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPA1P20036 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPA1P20036 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HLA-DPA1P20036 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPA1P20036 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPA1P20036 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPA1P20036 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPA1P20036 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPA1P20036 AL645608.8-201ENST00000606034 2086 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms