Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.56■□□□□ 0.4
KRT4P19013 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT4P19013 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT4P19013 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT4P19013 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT4P19013 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
KRT4P19013 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT4P19013 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT4P19013 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.56■□□□□ 0.4
KRT4P19013 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KRT4P19013 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
KRT4P19013 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT4P19013 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT4P19013 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT4P19013 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT4P19013 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT4P19013 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KRT4P19013 RNF216P1-203ENST00000404404 2427 ntBASIC17.55■□□□□ 0.4
KRT4P19013 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
KRT4P19013 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT4P19013 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT4P19013 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KRT4P19013 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT4P19013 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.55■□□□□ 0.4
KRT4P19013 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.55■□□□□ 0.4
KRT4P19013 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.55■□□□□ 0.4
KRT4P19013 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT4P19013 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT4P19013 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT4P19013 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT4P19013 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT4P19013 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
KRT4P19013 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT4P19013 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT4P19013 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT4P19013 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
KRT4P19013 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT4P19013 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
KRT4P19013 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.55■□□□□ 0.4
KRT4P19013 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT4P19013 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KRT4P19013 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT4P19013 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT4P19013 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT4P19013 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT4P19013 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT4P19013 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KRT4P19013 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT4P19013 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
KRT4P19013 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT4P19013 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT4P19013 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
KRT4P19013 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.54■□□□□ 0.4
KRT4P19013 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
KRT4P19013 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
KRT4P19013 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT4P19013 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT4P19013 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
KRT4P19013 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT4P19013 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.54■□□□□ 0.4
KRT4P19013 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT4P19013 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT4P19013 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
KRT4P19013 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT4P19013 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT4P19013 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT4P19013 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.54■□□□□ 0.4
KRT4P19013 AC112698.1-201ENST00000510299 916 ntBASIC17.54■□□□□ 0.4
KRT4P19013 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.54■□□□□ 0.4
KRT4P19013 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.54■□□□□ 0.4
KRT4P19013 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT4P19013 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.54■□□□□ 0.4
KRT4P19013 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.54■□□□□ 0.4
KRT4P19013 AC009154.2-201ENST00000621177 724 ntBASIC17.54■□□□□ 0.4
KRT4P19013 AC008741.2-201ENST00000612792 3115 ntBASIC17.54■□□□□ 0.4
KRT4P19013 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT4P19013 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT4P19013 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
KRT4P19013 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT4P19013 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT4P19013 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT4P19013 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT4P19013 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.54■□□□□ 0.4
KRT4P19013 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT4P19013 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT4P19013 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
KRT4P19013 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT4P19013 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.54■□□□□ 0.4
KRT4P19013 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT4P19013 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT4P19013 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT4P19013 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KRT4P19013 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT4P19013 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
KRT4P19013 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT4P19013 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT4P19013 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
KRT4P19013 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT4P19013 AC093525.9-201ENST00000624961 1746 ntBASIC17.53■□□□□ 0.4
KRT4P19013 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms