Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC130P13994 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC130P13994 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CCDC130P13994 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC130P13994 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC130P13994 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.5■□□□□ 0.55
CCDC130P13994 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC130P13994 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC130P13994 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC130P13994 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CCDC130P13994 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC130P13994 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC130P13994 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC130P13994 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CCDC130P13994 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.5■□□□□ 0.55
CCDC130P13994 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC130P13994 AC046185.3-201ENST00000623228 1824 ntBASIC18.5■□□□□ 0.55
CCDC130P13994 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC130P13994 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
CCDC130P13994 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC130P13994 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC130P13994 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC130P13994 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CCDC130P13994 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC130P13994 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CCDC130P13994 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCDC130P13994 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC130P13994 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC130P13994 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC130P13994 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC130P13994 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC130P13994 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC130P13994 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC130P13994 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC130P13994 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC130P13994 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCDC130P13994 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC130P13994 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC130P13994 SIGLEC30P-201ENST00000455569 941 ntBASIC18.49■□□□□ 0.55
CCDC130P13994 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC130P13994 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC130P13994 AL049840.3-201ENST00000602669 611 ntBASIC18.49■□□□□ 0.55
CCDC130P13994 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC130P13994 AL773604.1-201ENST00000617417 272 ntBASIC18.49■□□□□ 0.55
CCDC130P13994 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC130P13994 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC130P13994 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC130P13994 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC130P13994 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC130P13994 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC130P13994 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CCDC130P13994 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC130P13994 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC130P13994 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC130P13994 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC130P13994 LINC00896-202ENST00000609602 2128 ntBASIC18.49■□□□□ 0.55
CCDC130P13994 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC130P13994 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC130P13994 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCDC130P13994 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCDC130P13994 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC130P13994 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC130P13994 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC130P13994 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC130P13994 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC130P13994 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CCDC130P13994 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC130P13994 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC130P13994 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC130P13994 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC130P13994 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC130P13994 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
CCDC130P13994 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC130P13994 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC130P13994 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CCDC130P13994 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC130P13994 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC130P13994 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC130P13994 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC130P13994 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC130P13994 RNA5SP419-201ENST00000515908 135 ntBASIC18.48■□□□□ 0.55
CCDC130P13994 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC130P13994 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.48■□□□□ 0.55
CCDC130P13994 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC130P13994 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC130P13994 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
CCDC130P13994 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CCDC130P13994 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC130P13994 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC130P13994 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC130P13994 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC130P13994 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC130P13994 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC130P13994 HLA-A-201ENST00000376802 1334 ntBASIC18.48■□□□□ 0.55
CCDC130P13994 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC130P13994 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC130P13994 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC130P13994 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC130P13994 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC130P13994 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms