Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL11A1P12107 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.65■□□□□ 0.74
COL11A1P12107 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL11A1P12107 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.65■□□□□ 0.74
COL11A1P12107 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL11A1P12107 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL11A1P12107 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.65■□□□□ 0.74
COL11A1P12107 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL11A1P12107 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL11A1P12107 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
COL11A1P12107 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
COL11A1P12107 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL11A1P12107 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
COL11A1P12107 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL11A1P12107 TIMM8BP1-201ENST00000452384 211 ntBASIC19.65■□□□□ 0.74
COL11A1P12107 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.65■□□□□ 0.74
COL11A1P12107 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
COL11A1P12107 AC093520.2-201ENST00000561830 333 ntBASIC19.65■□□□□ 0.74
COL11A1P12107 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL11A1P12107 AC106028.4-201ENST00000614509 607 ntBASIC19.65■□□□□ 0.74
COL11A1P12107 AC105339.1-204ENST00000636249 355 ntBASIC19.65■□□□□ 0.74
COL11A1P12107 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.65■□□□□ 0.74
COL11A1P12107 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL11A1P12107 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
COL11A1P12107 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
COL11A1P12107 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
COL11A1P12107 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.64■□□□□ 0.74
COL11A1P12107 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
COL11A1P12107 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.64■□□□□ 0.74
COL11A1P12107 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.64■□□□□ 0.74
COL11A1P12107 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
COL11A1P12107 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
COL11A1P12107 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.64■□□□□ 0.73
COL11A1P12107 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
COL11A1P12107 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL11A1P12107 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.64■□□□□ 0.73
COL11A1P12107 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.64■□□□□ 0.73
COL11A1P12107 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.64■□□□□ 0.73
COL11A1P12107 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.64■□□□□ 0.73
COL11A1P12107 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.64■□□□□ 0.73
COL11A1P12107 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.64■□□□□ 0.73
COL11A1P12107 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL11A1P12107 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL11A1P12107 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL11A1P12107 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.64■□□□□ 0.73
COL11A1P12107 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.64■□□□□ 0.73
COL11A1P12107 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL11A1P12107 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL11A1P12107 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL11A1P12107 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
COL11A1P12107 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.63■□□□□ 0.73
COL11A1P12107 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.63■□□□□ 0.73
COL11A1P12107 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
COL11A1P12107 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL11A1P12107 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL11A1P12107 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL11A1P12107 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL11A1P12107 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL11A1P12107 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.63■□□□□ 0.73
COL11A1P12107 AC011467.4-201ENST00000594891 528 ntBASIC19.63■□□□□ 0.73
COL11A1P12107 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL11A1P12107 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL11A1P12107 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.63■□□□□ 0.73
COL11A1P12107 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.63■□□□□ 0.73
COL11A1P12107 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.63■□□□□ 0.73
COL11A1P12107 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL11A1P12107 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL11A1P12107 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
COL11A1P12107 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL11A1P12107 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
COL11A1P12107 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL11A1P12107 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.62■□□□□ 0.73
COL11A1P12107 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.62■□□□□ 0.73
COL11A1P12107 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
COL11A1P12107 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL11A1P12107 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL11A1P12107 Z92544.3-201ENST00000624747 417 ntBASIC19.62■□□□□ 0.73
COL11A1P12107 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL11A1P12107 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL11A1P12107 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL11A1P12107 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.62■□□□□ 0.73
COL11A1P12107 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL11A1P12107 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL11A1P12107 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
COL11A1P12107 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL11A1P12107 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.62■□□□□ 0.73
COL11A1P12107 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.62■□□□□ 0.73
COL11A1P12107 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
COL11A1P12107 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL11A1P12107 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
COL11A1P12107 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL11A1P12107 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.62■□□□□ 0.73
COL11A1P12107 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL11A1P12107 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.62■□□□□ 0.73
COL11A1P12107 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL11A1P12107 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.62■□□□□ 0.73
COL11A1P12107 HLA-J-203ENST00000494367 1087 ntBASIC19.62■□□□□ 0.73
COL11A1P12107 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
COL11A1P12107 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.62■□□□□ 0.73
COL11A1P12107 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms