Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
IGHV3-43DP0DP04 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.55□□□□□ -0.08
IGHV3-43DP0DP04 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.55□□□□□ -0.08
IGHV3-43DP0DP04 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
IGHV3-43DP0DP04 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.55□□□□□ -0.08
IGHV3-43DP0DP04 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IGHV3-43DP0DP04 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.55□□□□□ -0.08
IGHV3-43DP0DP04 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
IGHV3-43DP0DP04 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
IGHV3-43DP0DP04 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.55□□□□□ -0.08
IGHV3-43DP0DP04 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
IGHV3-43DP0DP04 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
IGHV3-43DP0DP04 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
IGHV3-43DP0DP04 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.55□□□□□ -0.08
IGHV3-43DP0DP04 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
IGHV3-43DP0DP04 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
IGHV3-43DP0DP04 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 LYSMD4-203ENST00000378904 2122 ntBASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 AP001094.4-201ENST00000579008 2176 ntBASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 AL136038.3-201ENST00000561909 1096 ntBASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
IGHV3-43DP0DP04 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 AC005332.1-201ENST00000577698 1310 ntBASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
IGHV3-43DP0DP04 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
IGHV3-43DP0DP04 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.52□□□□□ -0.08
IGHV3-43DP0DP04 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms