Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.29■□□□□ 0.68
TPM1P09493 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TPM1P09493 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.29■□□□□ 0.68
TPM1P09493 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TPM1P09493 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.28■□□□□ 0.68
TPM1P09493 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
TPM1P09493 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
TPM1P09493 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TPM1P09493 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TPM1P09493 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TPM1P09493 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.28■□□□□ 0.68
TPM1P09493 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.28■□□□□ 0.68
TPM1P09493 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TPM1P09493 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TPM1P09493 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TPM1P09493 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TPM1P09493 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.28■□□□□ 0.68
TPM1P09493 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.28■□□□□ 0.68
TPM1P09493 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.28■□□□□ 0.68
TPM1P09493 Z99916.2-201ENST00000604037 246 ntBASIC19.28■□□□□ 0.68
TPM1P09493 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TPM1P09493 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TPM1P09493 KRT8P47-201ENST00000604727 1398 ntBASIC19.28■□□□□ 0.68
TPM1P09493 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.28■□□□□ 0.68
TPM1P09493 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TPM1P09493 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TPM1P09493 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TPM1P09493 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TPM1P09493 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC19.27■□□□□ 0.68
TPM1P09493 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
TPM1P09493 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TPM1P09493 CICP6-201ENST00000457191 2729 ntBASIC19.27■□□□□ 0.68
TPM1P09493 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TPM1P09493 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.27■□□□□ 0.68
TPM1P09493 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TPM1P09493 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TPM1P09493 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TPM1P09493 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TPM1P09493 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TPM1P09493 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
TPM1P09493 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TPM1P09493 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.27■□□□□ 0.68
TPM1P09493 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.27■□□□□ 0.68
TPM1P09493 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
TPM1P09493 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.27■□□□□ 0.68
TPM1P09493 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TPM1P09493 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.27■□□□□ 0.68
TPM1P09493 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TPM1P09493 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.27■□□□□ 0.68
TPM1P09493 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TPM1P09493 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.27■□□□□ 0.68
TPM1P09493 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.27■□□□□ 0.68
TPM1P09493 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.27■□□□□ 0.68
TPM1P09493 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TPM1P09493 AL157888.1-201ENST00000631930 593 ntBASIC19.27■□□□□ 0.68
TPM1P09493 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
TPM1P09493 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.27■□□□□ 0.68
TPM1P09493 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TPM1P09493 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TPM1P09493 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TPM1P09493 UBALD1-205ENST00000590891 2641 ntBASIC19.27■□□□□ 0.68
TPM1P09493 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TPM1P09493 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TPM1P09493 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
TPM1P09493 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TPM1P09493 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TPM1P09493 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TPM1P09493 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TPM1P09493 AC105020.1-201ENST00000435356 2205 ntBASIC19.27■□□□□ 0.67
TPM1P09493 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TPM1P09493 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TPM1P09493 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.26■□□□□ 0.67
TPM1P09493 AC106886.4-201ENST00000623557 2502 ntBASIC19.26■□□□□ 0.67
TPM1P09493 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
TPM1P09493 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TPM1P09493 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TPM1P09493 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.26■□□□□ 0.67
TPM1P09493 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
TPM1P09493 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TPM1P09493 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TPM1P09493 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TPM1P09493 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TPM1P09493 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.26■□□□□ 0.67
TPM1P09493 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.26■□□□□ 0.67
TPM1P09493 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TPM1P09493 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TPM1P09493 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.26■□□□□ 0.67
TPM1P09493 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TPM1P09493 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TPM1P09493 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TPM1P09493 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TPM1P09493 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TPM1P09493 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.25■□□□□ 0.67
TPM1P09493 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TPM1P09493 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.25■□□□□ 0.67
TPM1P09493 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TPM1P09493 AL356309.3-201ENST00000624132 1934 ntBASIC19.25■□□□□ 0.67
TPM1P09493 LYSMD4-203ENST00000378904 2122 ntBASIC19.25■□□□□ 0.67
TPM1P09493 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TPM1P09493 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms