Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MT-ND3P03897 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MT-ND3P03897 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.83■□□□□ 0.45
MT-ND3P03897 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.83■□□□□ 0.45
MT-ND3P03897 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MT-ND3P03897 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.83■□□□□ 0.45
MT-ND3P03897 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
MT-ND3P03897 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
MT-ND3P03897 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MT-ND3P03897 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
MT-ND3P03897 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
MT-ND3P03897 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.83■□□□□ 0.45
MT-ND3P03897 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
MT-ND3P03897 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.83■□□□□ 0.45
MT-ND3P03897 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
MT-ND3P03897 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.83■□□□□ 0.45
MT-ND3P03897 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MT-ND3P03897 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MT-ND3P03897 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
MT-ND3P03897 SEC1P-202ENST00000473944 940 ntBASIC17.83■□□□□ 0.44
MT-ND3P03897 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
MT-ND3P03897 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.83■□□□□ 0.44
MT-ND3P03897 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MT-ND3P03897 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.83■□□□□ 0.44
MT-ND3P03897 AC093458.2-201ENST00000623150 629 ntBASIC17.83■□□□□ 0.44
MT-ND3P03897 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MT-ND3P03897 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MT-ND3P03897 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.83■□□□□ 0.44
MT-ND3P03897 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MT-ND3P03897 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MT-ND3P03897 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.83■□□□□ 0.44
MT-ND3P03897 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MT-ND3P03897 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MT-ND3P03897 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
MT-ND3P03897 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
MT-ND3P03897 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MT-ND3P03897 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MT-ND3P03897 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MT-ND3P03897 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MT-ND3P03897 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
MT-ND3P03897 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MT-ND3P03897 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MT-ND3P03897 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
MT-ND3P03897 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND3P03897 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
MT-ND3P03897 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND3P03897 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND3P03897 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND3P03897 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND3P03897 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
MT-ND3P03897 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND3P03897 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND3P03897 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
MT-ND3P03897 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND3P03897 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
MT-ND3P03897 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND3P03897 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND3P03897 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.82■□□□□ 0.44
MT-ND3P03897 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND3P03897 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.82■□□□□ 0.44
MT-ND3P03897 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.82■□□□□ 0.44
MT-ND3P03897 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.82■□□□□ 0.44
MT-ND3P03897 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.82■□□□□ 0.44
MT-ND3P03897 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
MT-ND3P03897 AC024243.1-201ENST00000609234 778 ntBASIC17.82■□□□□ 0.44
MT-ND3P03897 AC083849.1-201ENST00000615227 514 ntBASIC17.82■□□□□ 0.44
MT-ND3P03897 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND3P03897 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND3P03897 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.82■□□□□ 0.44
MT-ND3P03897 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND3P03897 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND3P03897 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MT-ND3P03897 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
MT-ND3P03897 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MT-ND3P03897 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MT-ND3P03897 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
MT-ND3P03897 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MT-ND3P03897 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MT-ND3P03897 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MT-ND3P03897 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
MT-ND3P03897 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.81■□□□□ 0.44
MT-ND3P03897 DDX43P3-201ENST00000441064 443 ntBASIC17.81■□□□□ 0.44
MT-ND3P03897 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.81■□□□□ 0.44
MT-ND3P03897 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.81■□□□□ 0.44
MT-ND3P03897 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.81■□□□□ 0.44
MT-ND3P03897 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.81■□□□□ 0.44
MT-ND3P03897 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MT-ND3P03897 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.81■□□□□ 0.44
MT-ND3P03897 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.81■□□□□ 0.44
MT-ND3P03897 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MT-ND3P03897 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.81■□□□□ 0.44
MT-ND3P03897 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.81■□□□□ 0.44
MT-ND3P03897 HYMAI.1-201ENST00000620949 238 ntBASIC17.81■□□□□ 0.44
MT-ND3P03897 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.81■□□□□ 0.44
MT-ND3P03897 AC106886.4-201ENST00000623557 2502 ntBASIC17.81■□□□□ 0.44
MT-ND3P03897 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MT-ND3P03897 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MT-ND3P03897 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MT-ND3P03897 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.81■□□□□ 0.44
MT-ND3P03897 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms