Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 MIR564-202ENST00000385049 94 ntBASIC13.17□□□□□ -0.3
HLA-DQA1P01909 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 C1QL1P1-201ENST00000568105 661 ntBASIC13.17□□□□□ -0.3
HLA-DQA1P01909 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 AC008687.6-201ENST00000596318 630 ntBASIC13.17□□□□□ -0.3
HLA-DQA1P01909 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQA1P01909 PAUPAR-201ENST00000630360 2965 ntBASIC13.17□□□□□ -0.3
HLA-DQA1P01909 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 AC022898.2-201ENST00000616822 1312 ntBASIC13.16□□□□□ -0.3
HLA-DQA1P01909 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 GAS7-202ENST00000396115 929 ntTSL 5 BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 SLC29A4P2-201ENST00000504749 1089 ntBASIC13.16□□□□□ -0.3
HLA-DQA1P01909 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 KRT18P6-201ENST00000555540 1265 ntBASIC13.16□□□□□ -0.3
HLA-DQA1P01909 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 AC116407.2-201ENST00000613639 860 ntBASIC13.16□□□□□ -0.3
HLA-DQA1P01909 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 MIR600HG-201ENST00000449175 5984 ntBASIC13.16□□□□□ -0.3
HLA-DQA1P01909 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQA1P01909 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms