Protein–RNA interactions for Protein: P00736

C1R, Complement C1r subcomponent, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1RP00736 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C1RP00736 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
C1RP00736 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.35■□□□□ 0.53
C1RP00736 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
C1RP00736 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.35■□□□□ 0.53
C1RP00736 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C1RP00736 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
C1RP00736 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.35■□□□□ 0.53
C1RP00736 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C1RP00736 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.35■□□□□ 0.53
C1RP00736 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.35■□□□□ 0.53
C1RP00736 CNN2P11-201ENST00000429351 262 ntBASIC18.35■□□□□ 0.53
C1RP00736 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.35■□□□□ 0.53
C1RP00736 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.35■□□□□ 0.53
C1RP00736 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.35■□□□□ 0.53
C1RP00736 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C1RP00736 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
C1RP00736 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
C1RP00736 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.35■□□□□ 0.53
C1RP00736 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.35■□□□□ 0.53
C1RP00736 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.35■□□□□ 0.53
C1RP00736 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C1RP00736 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
C1RP00736 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
C1RP00736 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C1RP00736 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
C1RP00736 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
C1RP00736 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.35■□□□□ 0.53
C1RP00736 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C1RP00736 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C1RP00736 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
C1RP00736 HCG11-201ENST00000411553 5696 ntBASIC18.34■□□□□ 0.53
C1RP00736 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
C1RP00736 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
C1RP00736 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
C1RP00736 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
C1RP00736 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C1RP00736 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C1RP00736 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C1RP00736 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C1RP00736 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C1RP00736 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.34■□□□□ 0.53
C1RP00736 KRT19P2-202ENST00000557173 1012 ntBASIC18.34■□□□□ 0.53
C1RP00736 AC018845.2-201ENST00000568326 409 ntBASIC18.34■□□□□ 0.53
C1RP00736 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.34■□□□□ 0.53
C1RP00736 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.34■□□□□ 0.53
C1RP00736 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.34■□□□□ 0.53
C1RP00736 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.34■□□□□ 0.53
C1RP00736 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.34■□□□□ 0.53
C1RP00736 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.34■□□□□ 0.53
C1RP00736 AC004877.2-201ENST00000623941 599 ntBASIC18.34■□□□□ 0.53
C1RP00736 AC010507.1-201ENST00000633895 436 ntBASIC18.34■□□□□ 0.53
C1RP00736 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C1RP00736 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
C1RP00736 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.34■□□□□ 0.53
C1RP00736 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.34■□□□□ 0.53
C1RP00736 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C1RP00736 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
C1RP00736 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C1RP00736 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C1RP00736 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
C1RP00736 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
C1RP00736 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
C1RP00736 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
C1RP00736 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
C1RP00736 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
C1RP00736 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
C1RP00736 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
C1RP00736 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.33■□□□□ 0.53
C1RP00736 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
C1RP00736 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
C1RP00736 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.33■□□□□ 0.52
C1RP00736 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
C1RP00736 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.33■□□□□ 0.52
C1RP00736 AC074386.1-202ENST00000463561 864 ntBASIC18.33■□□□□ 0.52
C1RP00736 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.33■□□□□ 0.52
C1RP00736 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.33■□□□□ 0.52
C1RP00736 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.33■□□□□ 0.52
C1RP00736 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.33■□□□□ 0.52
C1RP00736 AC023141.13-201ENST00000604991 943 ntBASIC18.33■□□□□ 0.52
C1RP00736 BCL2-203ENST00000589955 5011 ntBASIC18.33■□□□□ 0.52
C1RP00736 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.33■□□□□ 0.52
C1RP00736 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
C1RP00736 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
C1RP00736 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
C1RP00736 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.33■□□□□ 0.52
C1RP00736 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.33■□□□□ 0.52
C1RP00736 KRT18P55-202ENST00000578578 1546 ntBASIC18.33■□□□□ 0.52
C1RP00736 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.33■□□□□ 0.52
C1RP00736 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
C1RP00736 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
C1RP00736 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
C1RP00736 AC009949.1-201ENST00000623048 1830 ntBASIC18.33■□□□□ 0.52
C1RP00736 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
C1RP00736 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
C1RP00736 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
C1RP00736 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
C1RP00736 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
C1RP00736 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
C1RP00736 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms