Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VAPBO95292 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPBO95292 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPBO95292 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
VAPBO95292 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPBO95292 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
VAPBO95292 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
VAPBO95292 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPBO95292 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPBO95292 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPBO95292 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
VAPBO95292 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.57■□□□□ 0.4
VAPBO95292 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPBO95292 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.57■□□□□ 0.4
VAPBO95292 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
VAPBO95292 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VAPBO95292 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
VAPBO95292 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPBO95292 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPBO95292 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPBO95292 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPBO95292 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPBO95292 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VAPBO95292 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VAPBO95292 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPBO95292 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.57■□□□□ 0.4
VAPBO95292 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPBO95292 PCED1CP-201ENST00000419887 785 ntBASIC17.57■□□□□ 0.4
VAPBO95292 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.57■□□□□ 0.4
VAPBO95292 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.57■□□□□ 0.4
VAPBO95292 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.57■□□□□ 0.4
VAPBO95292 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.57■□□□□ 0.4
VAPBO95292 AC091607.1-201ENST00000490318 1060 ntBASIC17.57■□□□□ 0.4
VAPBO95292 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
VAPBO95292 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.57■□□□□ 0.4
VAPBO95292 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.57■□□□□ 0.4
VAPBO95292 AC019129.2-201ENST00000609837 1235 ntBASIC17.57■□□□□ 0.4
VAPBO95292 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VAPBO95292 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VAPBO95292 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPBO95292 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VAPBO95292 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPBO95292 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPBO95292 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPBO95292 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPBO95292 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.57■□□□□ 0.4
VAPBO95292 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPBO95292 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPBO95292 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
VAPBO95292 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VAPBO95292 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VAPBO95292 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VAPBO95292 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VAPBO95292 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VAPBO95292 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.56■□□□□ 0.4
VAPBO95292 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.56■□□□□ 0.4
VAPBO95292 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VAPBO95292 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VAPBO95292 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
VAPBO95292 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
VAPBO95292 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
VAPBO95292 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VAPBO95292 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VAPBO95292 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VAPBO95292 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
VAPBO95292 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
VAPBO95292 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VAPBO95292 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VAPBO95292 AC246785.2-201ENST00000432512 513 ntBASIC17.56■□□□□ 0.4
VAPBO95292 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.56■□□□□ 0.4
VAPBO95292 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.56■□□□□ 0.4
VAPBO95292 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VAPBO95292 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.56■□□□□ 0.4
VAPBO95292 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
VAPBO95292 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
VAPBO95292 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
VAPBO95292 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.56■□□□□ 0.4
VAPBO95292 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.56■□□□□ 0.4
VAPBO95292 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.56■□□□□ 0.4
VAPBO95292 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VAPBO95292 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
VAPBO95292 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VAPBO95292 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VAPBO95292 TNRC18P3-201ENST00000441896 2691 ntBASIC17.55■□□□□ 0.4
VAPBO95292 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VAPBO95292 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
VAPBO95292 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VAPBO95292 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.55■□□□□ 0.4
VAPBO95292 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
VAPBO95292 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.55■□□□□ 0.4
VAPBO95292 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VAPBO95292 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
VAPBO95292 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
VAPBO95292 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VAPBO95292 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VAPBO95292 TSSC2-201ENST00000450217 709 ntBASIC17.55■□□□□ 0.4
VAPBO95292 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.55■□□□□ 0.4
VAPBO95292 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.55■□□□□ 0.4
VAPBO95292 AC122714.2-201ENST00000502787 707 ntBASIC17.55■□□□□ 0.4
VAPBO95292 IGHV3-52-201ENST00000519770 353 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms