Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.46■□□□□ 0.23
SNX4O95219 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX4O95219 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.46■□□□□ 0.23
SNX4O95219 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.46■□□□□ 0.23
SNX4O95219 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX4O95219 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX4O95219 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX4O95219 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX4O95219 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX4O95219 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX4O95219 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.46■□□□□ 0.23
SNX4O95219 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.46■□□□□ 0.23
SNX4O95219 AC104819.1-201ENST00000504587 486 ntBASIC16.46■□□□□ 0.23
SNX4O95219 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.46■□□□□ 0.23
SNX4O95219 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX4O95219 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.46■□□□□ 0.23
SNX4O95219 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX4O95219 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.46■□□□□ 0.23
SNX4O95219 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SNX4O95219 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.46■□□□□ 0.23
SNX4O95219 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.46■□□□□ 0.23
SNX4O95219 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.46■□□□□ 0.23
SNX4O95219 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
SNX4O95219 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SNX4O95219 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.46■□□□□ 0.23
SNX4O95219 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.46■□□□□ 0.23
SNX4O95219 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SNX4O95219 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SNX4O95219 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SNX4O95219 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.46■□□□□ 0.23
SNX4O95219 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SNX4O95219 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.46■□□□□ 0.23
SNX4O95219 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX4O95219 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
SNX4O95219 AC022211.2-201ENST00000585075 2527 ntBASIC16.46■□□□□ 0.22
SNX4O95219 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SNX4O95219 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.46■□□□□ 0.22
SNX4O95219 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.45■□□□□ 0.22
SNX4O95219 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNX4O95219 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.45■□□□□ 0.22
SNX4O95219 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX4O95219 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.45■□□□□ 0.22
SNX4O95219 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNX4O95219 AC093010.1-201ENST00000473625 1624 ntBASIC16.45■□□□□ 0.22
SNX4O95219 AL121761.2-201ENST00000598007 1648 ntBASIC16.45■□□□□ 0.22
SNX4O95219 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SNX4O95219 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX4O95219 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNX4O95219 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
SNX4O95219 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNX4O95219 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.45■□□□□ 0.22
SNX4O95219 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX4O95219 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNX4O95219 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.45■□□□□ 0.22
SNX4O95219 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SNX4O95219 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SNX4O95219 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SNX4O95219 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
SNX4O95219 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX4O95219 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX4O95219 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX4O95219 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX4O95219 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX4O95219 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNX4O95219 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNX4O95219 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.45■□□□□ 0.22
SNX4O95219 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNX4O95219 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNX4O95219 MTCL1P1-201ENST00000446207 792 ntBASIC16.45■□□□□ 0.22
SNX4O95219 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.45■□□□□ 0.22
SNX4O95219 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SNX4O95219 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.45■□□□□ 0.22
SNX4O95219 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNX4O95219 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.45■□□□□ 0.22
SNX4O95219 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNX4O95219 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.45■□□□□ 0.22
SNX4O95219 PRELID1P1-202ENST00000567272 903 ntBASIC16.45■□□□□ 0.22
SNX4O95219 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.45■□□□□ 0.22
SNX4O95219 CLEC4GP1-201ENST00000596555 870 ntBASIC16.45■□□□□ 0.22
SNX4O95219 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNX4O95219 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.45■□□□□ 0.22
SNX4O95219 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
SNX4O95219 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNX4O95219 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.45■□□□□ 0.22
SNX4O95219 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.45■□□□□ 0.22
SNX4O95219 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.45■□□□□ 0.22
SNX4O95219 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX4O95219 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX4O95219 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX4O95219 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX4O95219 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX4O95219 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
SNX4O95219 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX4O95219 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.45■□□□□ 0.22
SNX4O95219 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SNX4O95219 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
SNX4O95219 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SNX4O95219 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNX4O95219 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNX4O95219 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms